RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SERPIND1P05546 499 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 CRKP46108 304 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 OXCT1P55809 520 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF579Q8NAF0 562 aaKnown RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 WDR48Q8TAF3 677 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 A0A0D9SFI3 127 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SERPINB9P50453 376 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 L3MBTL3Q96JM7 780 aaPredicted RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 NLNQ9BYT8 704 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 ACSL3O95573 720 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 CETPP11597 493 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 CCNG2Q16589 344 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 ZCWPW2Q504Y3 356 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 SH3BP5LQ7L8J4 393 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 MRPL1Q9BYD6 325 aaKnown RBP13.82□□□□□ -0.2
PRDM16-201ENST00000270722 KLHL11Q9NVR0 708 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 PCDHA13Q9Y5I0 950 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 TMEM94Q12767 1356 aa13.82□□□□□ -0.2
PRDM16-201ENST00000270722 GRID2IPA4D2P6 1211 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 SUPT20HL2P0C7V6 817 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 SERPINH1P50454 418 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 COG2Q14746 738 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 SARM1Q6SZW1 724 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 GRPEL2Q8TAA5 225 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 PPP1R14AQ96A00 147 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 EAF2Q96CJ1 260 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 LNPEPQ9UIQ6 1025 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TSPOAP1O95153 1857 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 NDUFA10O95299 355 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 CLUP10909 449 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 EIF2S3P41091 472 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 BTN3A2P78410 334 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TWF1Q12792 350 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 CCDC142Q17RM4 750 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 AGGF1Q8N302 714 aaeCLIP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF285Q96NJ3 590 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 PLCL2Q9UPR0 1127 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 DFFAO00273 331 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 MAPK1P28482 360 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TAF8Q7Z7C8 310 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 C18orf25Q96B23 403 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 CNTRLQ7Z7A1 2325 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 VWA5AO00534 786 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 RPS6KA4O75676 772 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 ADARP55265 1226 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM74Q86UV6 250 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM73Q86UV7 250 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 SIK2Q9H0K1 926 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 DHX35Q9H5Z1 703 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 A0A0G2JND7 137 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM64A6NGJ6 449 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM64BA6NI03 449 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 ALOX15P16050 662 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 MUTP22033 750 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 ERAP2Q6P179 960 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 CAMKK2Q96RR4 588 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TESK2Q96S53 571 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 TRIM51Q9BSJ1 452 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 RNPEPQ9H4A4 650 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 PIN4Q9Y237 131 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 ABCB1P08183 1280 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 USP39Q53GS9 565 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 APPL1Q9UKG1 709 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 OPLAHO14841 1288 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 STX5Q13190 355 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 PEX6Q13608 980 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 SUGP1Q8IWZ8 645 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 IARS2Q9NSE4 1012 aaKnown RBP13.81□□□□□ -0.2
PRDM16-201ENST00000270722 RAB23Q9ULC3 237 aa13.81□□□□□ -0.2
PRDM16-201ENST00000270722 STK36Q9NRP7 1315 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 HEATR9A2RTY3 570 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 RFC5P40937 340 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 CCT8P50990 548 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 VAMP7P51809 220 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 CORO7P57737 925 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 USF2Q15853 346 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 LRRC24Q50LG9 513 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 MOSPD2Q8NHP6 518 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ZNF24P17028 368 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 C6orf10Q5SRN2 563 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PTRHD1Q6GMV3 140 aaKnown RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ELOA2Q8IYF1 753 aaPredicted RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
PRDM16-201ENST00000270722 TMEM237Q96Q45 408 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 ATP7BP35670 1465 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 H0Y3Z8 333 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PLD1Q13393 1074 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 PDK1Q15118 436 aa13.8□□□□□ -0.2
PRDM16-201ENST00000270722 POLR3FQ9H1D9 316 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms