RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CTSAP10619 480 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 RAPGEF1Q13905 1077 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 PSMD6Q15008 389 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 ASIC2Q16515 512 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 KRT39Q6A163 491 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 CRELD2Q6UXH1 353 aaPredicted RBP26.4■■□□□ 1.82
SSBP4-201ENST00000270061 MSLNLQ96KJ4 702 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 MSTO1Q9BUK6 570 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 STK33Q9BYT3 514 aa26.4■■□□□ 1.82
SSBP4-201ENST00000270061 BARX2Q9UMQ3 279 aaPredicted RBP26.4■■□□□ 1.82
SSBP4-201ENST00000270061 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.39■■□□□ 1.82
SSBP4-201ENST00000270061 SRGAP2BP0DMP2 458 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 IRF2BP2Q7Z5L9 587 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 FMNL3Q8IVF7 1028 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 CCDC127Q96BQ5 260 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 VN1R3Q9BXE9 311 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 IRAK3Q9Y616 596 aa26.39■■□□□ 1.82
SSBP4-201ENST00000270061 CLDN3O15551 220 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 PRKCIP41743 596 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 KIF11P52732 1056 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 RBM10P98175 930 aaKnown RBP26.38■■□□□ 1.81
SSBP4-201ENST00000270061 ZNF568Q3ZCX4 644 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 VN1R2Q8NFZ6 395 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 AUTS2Q8WXX7 1259 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 MARCH5Q9NX47 278 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 ARHGAP25P42331 645 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 SMAD4Q13485 552 aaKnown RBP26.38■■□□□ 1.81
SSBP4-201ENST00000270061 SPA17Q15506 151 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 SYT10Q6XYQ8 523 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 TCHPQ9BT92 498 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 DEF6Q9H4E7 631 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 HAUS4Q9H6D7 363 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 PTPRHQ9HD43 1115 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 DNAJC12Q9UKB3 198 aa26.38■■□□□ 1.81
SSBP4-201ENST00000270061 AJAP1Q9UKB5 411 aaPredicted RBP26.38■■□□□ 1.81
SSBP4-201ENST00000270061 MBTPS2O43462 519 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 THP07101 528 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 PROZP22891 400 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 MCL1Q07820 350 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 KCNC3Q14003 757 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 ARHGAP29Q52LW3 1261 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 COLEC11Q9BWP8 271 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 CDT1Q9H211 546 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 LZTFL1Q9NQ48 299 aa26.37■■□□□ 1.81
SSBP4-201ENST00000270061 A0A0U1RQJ8 604 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 ABLIM1O14639 778 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 AKR1B10O60218 316 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 ANXA13P27216 316 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 STAT1P42224 750 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 KLHL30Q0D2K2 578 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 PHLDB3Q6NSJ2 640 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 LLGL2Q6P1M3 1020 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 GJB7Q6PEY0 223 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 TMEM184AQ6ZMB5 413 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 SMRP1Q8NCR6 262 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 ATRIPQ8WXE1 791 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 ZNF592Q92610 1267 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 ANKFY1Q9P2R3 1169 aa26.36■■□□□ 1.81
SSBP4-201ENST00000270061 PTGESO14684 152 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 ZNF263O14978 683 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 SOD2P04179 222 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 MATR3P43243 847 aaKnown RBP eCLIP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 ACOT2P49753 483 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 TUSC3Q13454 348 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 TDRD12Q587J7 1177 aaKnown RBP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 MPZL3Q6UWV2 235 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 C15orf39Q6ZRI6 1047 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 ZBTB33Q86T24 672 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 POP1Q99575 1024 aaKnown RBP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 MYO1AQ9UBC5 1043 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 FAM189A1O60320 539 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 FERP16591 822 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 SMAD2Q15796 467 aaKnown RBP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 SV2AQ7L0J3 742 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 CEP120Q8N960 986 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 CCDC94Q9BW85 323 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 CXCL16Q9H2A7 254 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 RBAKQ9NYW8 714 aaPredicted RBP26.35■■□□□ 1.81
SSBP4-201ENST00000270061 HCFC2Q9Y5Z7 792 aa26.35■■□□□ 1.81
SSBP4-201ENST00000270061 F8VZ95 297 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 F8W810 466 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 KIF5CO60282 957 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 CLASP2O75122 1294 aaKnown RBP26.34■■□□□ 1.81
SSBP4-201ENST00000270061 MCF2P10911 925 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 SOX5P35711 763 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 GRM5P41594 1212 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 VAV2P52735 878 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 YARSP54577 528 aaKnown RBP26.34■■□□□ 1.81
SSBP4-201ENST00000270061 GNG11P61952 73 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 DRAP1Q14919 205 aaPredicted RBP26.34■■□□□ 1.81
SSBP4-201ENST00000270061 FBXL13Q8NEE6 735 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 FNBP1Q96RU3 617 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 MRPL17Q9NRX2 175 aaKnown RBP26.34■■□□□ 1.81
SSBP4-201ENST00000270061 TOPORSQ9NS56 1045 aaPredicted RBP26.34■■□□□ 1.81
SSBP4-201ENST00000270061 DNAI1Q9UI46 699 aa26.34■■□□□ 1.81
SSBP4-201ENST00000270061 OGTO15294 1046 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 DLATP10515 647 aaKnown RBP26.33■■□□□ 1.81
SSBP4-201ENST00000270061 OSTNP61366 133 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 KIAA1328Q86T90 577 aa26.33■■□□□ 1.81
SSBP4-201ENST00000270061 CASP10Q92851 521 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms