RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 PRR12Q9ULL5 1215 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 DYRK1BQ9Y463 629 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 MIF4GDA9UHW6 222 aaKnown RBP13.15□□□□□ -0.3
CDH11-201ENST00000268603 DPCR1Q3MIW9 517 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 VTI1BQ9UEU0 232 aa13.15□□□□□ -0.3
CDH11-201ENST00000268603 POLRMTO00411 1230 aaKnown RBP13.15□□□□□ -0.31
CDH11-201ENST00000268603 ENDOD1O94919 500 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 MBL2P11226 248 aaPredicted RBP13.15□□□□□ -0.31
CDH11-201ENST00000268603 NOS3P29474 1203 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 CDC25BP30305 580 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 SOX6P35712 828 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 ARF5P84085 180 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 SNRNP27Q8WVK2 155 aaKnown RBP13.15□□□□□ -0.31
CDH11-201ENST00000268603 SLITRK1Q96PX8 696 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 ECSITQ9BQ95 431 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 PCDHB6Q9Y5E3 794 aa13.15□□□□□ -0.31
CDH11-201ENST00000268603 SPATA31E1Q6ZUB1 1445 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 NCF1BA6NI72 391 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 NCF1CA8MVU1 366 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 ZBTB5O15062 677 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 P4HBP07237 508 aaKnown RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 NCF1P14598 390 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 MAGEA9P43362 315 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 CYLC2Q14093 348 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 ESRP1Q6NXG1 681 aaKnown RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 BNIPLQ7Z465 357 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 SRLQ86TD4 932 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 PCYOX1LQ8NBM8 494 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 WDR36Q8NI36 951 aaKnown RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 ASXL2Q76L83 1435 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 ZNF335Q9H4Z2 1342 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 PSMD14O00487 310 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 CPSF4O95639 269 aaKnown RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 ADD2P35612 726 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 GYS2P54840 703 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 PODNQ7Z5L7 613 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 SCNN1BP51168 640 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 SNX8Q9Y5X2 465 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 FAM25AB3EWG3 89 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 FAM25CB3EWG5 89 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 FAM25GB3EWG6 89 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 CCDC188H7C350 402 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 AIM2O14862 343 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 WDR72Q3MJ13 1102 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 SKA1Q96BD8 255 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 NACC2Q96BF6 587 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 RIC8BQ9NVN3 520 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 TRPC4Q9UBN4 977 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
CDH11-201ENST00000268603 GRAP2O75791 330 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 CLTBP09497 229 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 TAP1Q03518 808 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 TMEM169Q96HH4 297 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 PDCD10Q9BUL8 212 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 TMCC3Q9ULS5 477 aa13.14□□□□□ -0.31
CDH11-201ENST00000268603 PIPSLA2A3N6 862 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 IL13P35225 146 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 RIN2Q8WYP3 895 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 PARK7Q99497 189 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 LXNQ9BS40 222 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 THUMPD3Q9BV44 507 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 HMGCS2P54868 508 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 SCARA3Q6AZY7 606 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 UGT3A1Q6NUS8 523 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 R3HCC1LQ7Z5L2 792 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 TRIT1Q9H3H1 467 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 MTMR6Q9Y217 621 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 OR6A2O95222 327 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 CYP4Z1Q86W10 505 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 NLNQ9BYT8 704 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 AVENQ9NQS1 362 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 CEP72Q9P209 647 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 MARCOQ9UEW3 520 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 PLEKHA8P1O95397 391 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 KRT6AP02538 564 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 KRT6BP04259 564 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 KRT6CP48668 564 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 STAT5BP51692 787 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
CDH11-201ENST00000268603 CYP51A1Q16850 503 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 RNF180Q86T96 592 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 OR8H2Q8N162 312 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 RBBP8Q99708 897 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 WWP1Q9H0M0 922 aa13.13□□□□□ -0.31
CDH11-201ENST00000268603 HDHD2Q9H0R4 259 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms