RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 NRXN3Q9Y4C0 1643 aa12.12□□□□□ -0.47
VPS33A-201ENST00000267199 SNX3O60493 162 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 FDX1P10109 184 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ZNF200P98182 395 aaPredicted RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 HABP4Q5JVS0 413 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 DAB2IPQ5VWQ8 1189 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 MYLK4Q86YV6 388 aaPredicted RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 HACE1Q8IYU2 909 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 SLC5A5Q92911 643 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TARS2Q9BW92 718 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 KRT82Q9NSB4 513 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 GOLGA8QA0A0J9YX86 632 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 GOLGA8OA6NCC3 632 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 GOLGA8NF8WBI6 632 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 DGKIO75912 1065 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 WEE2P0C1S8 567 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 DRD4P21917 467 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 PRKCEQ02156 737 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ERMARDQ5T6L9 678 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TRIM67Q6ZTA4 783 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 RPS6KC1Q96S38 1066 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 XPOTO43592 962 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 MYL2P10916 166 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 CYP11B1P15538 503 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 SDC4P31431 198 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 FLT3P36888 993 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TAF12Q16514 161 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 KIF19Q2TAC6 998 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 Q3C1V9 767 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ACAD10Q6JQN1 1059 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ZFPM1Q8IX07 1006 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ELMO3Q96BJ8 720 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 MRC1P22897 1456 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 CST8O60676 142 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 STAT5BP51692 787 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 DSG1Q02413 1049 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 NDUFAF2Q8N183 169 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TAS1R2Q8TE23 839 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ALKBH8Q96BT7 664 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TMA16Q96EY4 203 aaKnown RBP12.11□□□□□ -0.47
VPS33A-201ENST00000267199 ING2Q9H160 280 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 MYLK2Q9H1R3 596 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 FBXO40Q9UH90 709 aa12.11□□□□□ -0.47
VPS33A-201ENST00000267199 TRIM49D1C9J1S8 452 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 ZNF263O14978 683 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 SLITRK3O94933 977 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 UPP2O95045 317 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 SLC4A1P02730 911 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 HNRNPH3P31942 346 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 MORF4L2Q15014 288 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 B4GALNT2Q8NHY0 566 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 E2F7Q96AV8 911 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 EME1Q96AY2 570 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 PGM2Q96G03 612 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 KCNN4O15554 427 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 PYGMP11217 842 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 GZMAP12544 262 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 SOX11P35716 441 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 SLC12A3P55017 1021 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 POU5F1BQ06416 359 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 MROH9Q5TGP6 573 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 SLC47A2Q86VL8 602 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 CD302Q8IX05 232 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 KRT35Q92764 455 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 ANKEF1Q9NU02 776 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 KLHL8Q9P2G9 620 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 BAG5Q9UL15 447 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 XRN1Q8IZH2 1706 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 MAP3K6O95382 1288 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 RBP3P10745 1247 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 RRM1P23921 792 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 PTPN4P29074 926 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 KPNB1Q14974 876 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 FAXCQ5TGI0 409 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 ARHGEF26Q96DR7 871 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 TEX13BQ9BXU2 312 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 TOPORSQ9NS56 1045 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 DCDC2CA8MYV0 355 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 HSPA8P11142 646 aaKnown RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 RXRBP28702 533 aa12.1□□□□□ -0.47
VPS33A-201ENST00000267199 FOXD4Q12950 439 aaPredicted RBP12.1□□□□□ -0.47
VPS33A-201ENST00000267199 EMC2Q15006 297 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms