RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 TSPAN18Q96SJ8 248 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 HMX1Q9NP08 348 aaPredicted RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 RBM12Q9NTZ6 932 aaKnown RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 TRMT13Q9NUP7 481 aaKnown RBP12.3□□□□□ -0.44
SCAF11-201ENST00000266589 SNX9Q9Y5X1 595 aa12.3□□□□□ -0.44
SCAF11-201ENST00000266589 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 MIF4GDA9UHW6 222 aaKnown RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 GPR182O15218 404 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 CD4P01730 458 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 ATF7P17544 494 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 MMP8P22894 467 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 GRK4P32298 578 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 NDST1P52848 882 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 PTK7Q13308 1070 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 USP38Q8NB14 1042 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 FAM124BQ9H5Z6 455 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 AGO3Q9H9G7 860 aaKnown RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 CHST12Q9NRB3 414 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 FAM105AQ9NUU6 356 aa12.29□□□□□ -0.44
SCAF11-201ENST00000266589 BARX2Q9UMQ3 279 aaPredicted RBP12.29□□□□□ -0.44
SCAF11-201ENST00000266589 PGRMC1O00264 195 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 SPOPO43791 374 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 GHRP10912 638 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 SOX4Q06945 474 aaPredicted RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 DCAF12L1Q5VU92 463 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 LHX8Q68G74 356 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 DENND1BQ6P3S1 775 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 MTERF4Q7Z6M4 381 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 CPNE8Q86YQ8 564 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 WDTC1Q8N5D0 677 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 UBL4BQ8N7F7 174 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 KRT35Q92764 455 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 HEXIM2Q96MH2 286 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 GOLGA2P5Q9HBQ8 144 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 MRPL47Q9HD33 250 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 ERVK-5Q9HDB9 667 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 SAGE1Q9NXZ1 904 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 RAB21Q9UL25 225 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 SCINQ9Y6U3 715 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 MEIS3P2A8K0S8 358 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PIRO00625 290 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PTGESO14684 152 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 CALB1P05937 261 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 CD52P31358 61 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PRMT2P55345 433 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PAK2Q13177 524 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 FBXO47Q5MNV8 452 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 CCDC70Q6NSX1 233 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 HACE1Q8IYU2 909 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 RASGEF1CQ8N431 466 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 ALG3Q92685 438 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 ZFP42Q96MM3 310 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 ZNF560Q96MR9 790 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■□□□□ 10.8
SCAF11-201ENST00000266589 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 TSEN34Q9BSV6 310 aaKnown RBP12.28□□□□□ -0.44
SCAF11-201ENST00000266589 WNT8AQ9H1J5 351 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 CARD9Q9H257 536 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 LHX5Q9H2C1 402 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PADI3Q9ULW8 664 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
SCAF11-201ENST00000266589 A0A1W2PQ45 241 aaPredicted RBP12.27□□□□□ -0.45
SCAF11-201ENST00000266589 A0A1W2PQY0 241 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 MYO1FO00160 1098 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 VDRP11473 427 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 ITGA4P13612 1032 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 CYP3A5P20815 502 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 VSNL1P62760 191 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 TRIM71Q2Q1W2 868 aaKnown RBP12.27□□□□□ -0.45
SCAF11-201ENST00000266589 SGO2Q562F6 1265 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 ERICH1Q86X53 443 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 CD101Q93033 1021 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 LRRC1Q9BTT6 524 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 NT5C1AQ9BXI3 368 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 PARVAQ9NVD7 372 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.27□□□□□ -0.45
SCAF11-201ENST00000266589 TRIM17Q9Y577 477 aa12.27□□□□□ -0.45
SCAF11-201ENST00000266589 TARSL2A2RTX5 802 aaKnown RBP12.26□□□□□ -0.45
SCAF11-201ENST00000266589 M0QYV0 167 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 MICAL2O94851 1124 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 GJB6O95452 261 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 CTNNA1P35221 906 aaKnown RBP12.26□□□□□ -0.45
SCAF11-201ENST00000266589 MLH1P40692 756 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 PNPLA4P41247 253 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 ZNF211Q13398 564 aaPredicted RBP12.26□□□□□ -0.45
SCAF11-201ENST00000266589 LPIN1Q14693 890 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 BRD3Q15059 726 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 DPH6Q7L8W6 267 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 LPPQ93052 612 aa12.26□□□□□ -0.45
SCAF11-201ENST00000266589 RNPC3Q96LT9 517 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms