RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CHRNA3P32297 505 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SLC16A2P36021 539 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CRKP46108 304 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 KPNA1P52294 538 aaPredicted RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 KRT17Q04695 432 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 MED21Q13503 144 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SPARCL1Q14515 664 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 PPP1R21Q6ZMI0 780 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SV2BQ7L1I2 683 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 TRABD2AQ86V40 505 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SYCE1Q8N0S2 351 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 LRRC43Q8N309 656 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ZNF276Q8N554 614 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CFAP61Q8NHU2 1237 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SLC30A5Q8TAD4 765 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 TMIGD2Q96BF3 282 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 HEPHQ9BQS7 1158 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 NMUR2Q9GZQ4 415 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SELENONQ9NZV5 590 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 LGALS13Q9UHV8 139 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CLEC11AQ9Y240 323 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
VAPB-201ENST00000265619 ZMYM2Q9UBW7 1377 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 B2RBV5 119 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 E5RJQ4 531 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 DKC1O60832 514 aaKnown RBP eCLIP9.24□□□□□ -0.93
VAPB-201ENST00000265619 RCVRNP35243 200 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CASP5P51878 434 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 PDE1BQ01064 536 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 COASYQ13057 564 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 PRKG1Q13976 671 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 TGFBIQ15582 683 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 HSF5Q4G112 596 aaPredicted RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 C12orf60Q5U649 245 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 DQX1Q8TE96 717 aaKnown RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 SKA1Q96BD8 255 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 GCNAQ96QF7 691 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 KLF6Q99612 283 aaPredicted RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 THTPAQ9BU02 230 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 MAK16Q9BXY0 300 aaKnown RBP9.24□□□□□ -0.93
VAPB-201ENST00000265619 KIAA1586Q9HCI6 787 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 CHST7Q9NS84 486 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 ANGPTL2Q9UKU9 493 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 PLA2G4CQ9UP65 541 aa9.24□□□□□ -0.93
VAPB-201ENST00000265619 A0A0A6YYK5 440 aaPredicted RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 TESPA1A2RU30 521 aaPredicted RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 E9PBE3 544 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 POC1B-GALNT4F8VUJ3 575 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ENO1P06733 434 aaKnown RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 PIM1P11309 404 aaPredicted RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 SERPINB8P50452 374 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 RCAN1P53805 252 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 FASTKD3Q14CZ7 662 aaKnown RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 LVRNQ6Q4G3 990 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CROCCP2Q86T23 111 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 MYOCDQ8IZQ8 938 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 BBS5Q8N3I7 341 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 POU5F2Q8N7G0 328 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 GIPC3Q8TF64 312 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 RUNDC3BQ96NL0 473 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 NUP85Q9BW27 656 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 HESX1Q9UBX0 185 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 OR52Z1P0C646 297 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ESRRAP11474 423 aaPredicted RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 AKR1B1P15121 316 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CHN2P52757 468 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 JAM2P57087 298 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 PPIDQ08752 370 aaKnown RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 LPIN1Q14693 890 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 KIF22Q14807 665 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 C10orf76Q5T2E6 689 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ULK2Q8IYT8 1036 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 HIPK4Q8NE63 616 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 GRIN3AQ8TCU5 1115 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 RSPH1Q8WYR4 309 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 RFFLQ8WZ73 363 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 IRGQQ8WZA9 623 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 LARP4BQ92615 738 aaKnown RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 DNAJC19Q96DA6 116 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CEP95Q96GE4 821 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CENPOQ9BU64 300 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CCDC28BQ9BUN5 200 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 TRABDQ9H4I3 376 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 DNAJC18Q9H819 358 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 APPL1Q9UKG1 709 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 HDAC9Q9UKV0 1011 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 GOLGA8RI6L899 631 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 PODXLO00592 558 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CA4P22748 312 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 RRM1P23921 792 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 PPP1R2P41236 205 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 KDSRQ06136 332 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 DCAF17Q5H9S7 520 aaPredicted RBP9.23□□□□□ -0.93
VAPB-201ENST00000265619 PPP1R2P3Q6NXS1 205 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 CDC42EP5Q6NZY7 148 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms