RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 ZNF568Q3ZCX4 644 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRR23CQ6ZRP0 262 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 YTHDF3Q7Z739 585 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CD109Q6YHK3 1445 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TNRQ92752 1358 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 IRGMA1A4Y4 181 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 AXIN1O15169 862 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CLDN3O15551 220 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 GLRA3O75311 464 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ARSEP51690 589 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SLC7A5Q01650 507 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SCRN1Q12765 414 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 STX4Q12846 297 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EZH2Q15910 746 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 LPCAT2Q7L5N7 544 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SLC22A9Q8IVM8 553 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TGFBRAP1Q8WUH2 860 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 NARS2Q96I59 477 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ELMO2Q96JJ3 720 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 Q96MT0 163 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EPB41L4BQ9H329 900 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MYL12AP19105 171 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 HNRNPH1P31943 449 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 TRAP1Q12931 704 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 LRRC36Q1X8D7 754 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 RASGRP2Q7LDG7 609 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CDK20Q8IZL9 346 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EIF1ADQ8N9N8 165 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PI4K2BQ8TCG2 481 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SLC20A1Q8WUM9 679 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TMA16Q96EY4 203 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 MS4A14Q96JA4 679 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SRPK1Q96SB4 655 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ATP9AO75110 1047 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TAF5LO75529 589 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CYP2C8P10632 490 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MUTP22033 750 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 FASP25445 335 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EIF5AP63241 154 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CCNI2Q6ZMN8 369 aaPredicted RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 DCAF4Q8WV16 495 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 UGT2B28Q9BY64 529 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SAR1AQ9NR31 198 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TLR7Q9NYK1 1049 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 SLC24A2Q9UI40 661 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PCF11O94913 1555 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CYP2D7A0A087X1C5 515 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 NDUFS3O75489 264 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 NPM3O75607 178 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 RPL22P35268 128 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ADD1P35611 737 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 CTSWP56202 376 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TUBA1BP68363 451 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CTDSPL2Q05D32 466 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EFR3AQ14156 821 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 RCN1Q15293 331 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SUPT20HL1Q3ZLR7 823 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 FAM98BQ52LJ0 330 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 TNFAIP8L3Q5GJ75 292 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TUBA1AQ71U36 451 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 PRPF39Q86UA1 669 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PM20D2Q8IYS1 436 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ANKRD7Q92527 254 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SENP7Q9BQF6 1050 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 C17orf80Q9BSJ5 609 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 RIBC2Q9H4K1 309 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MOV10Q9HCE1 1003 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 BSDC1Q9NW68 430 aaPredicted RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 COMMD8Q9NX08 183 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 GALNT8Q9NY28 637 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 TAGLN3Q9UI15 199 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.68□□□□□ -1.5
XRN1-201ENST00000264951 EIF4G3O43432 1585 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ADGRF5Q8IZF2 1346 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ADGRA2Q96PE1 1338 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 PHGDHO43175 533 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ANXA9O76027 345 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 SEC24BO95487 1268 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MSH3P20585 1137 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 GRIK1P39086 918 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 DNAJC3Q13217 504 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 B3GNT6Q6ZMB0 384 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 EXOC3L1Q86VI1 746 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MAPKAPK5Q8IW41 473 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 BLOC1S5Q8TDH9 187 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 ACOT12Q8WYK0 555 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CNKSR1Q969H4 720 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MKNK1Q9BUB5 465 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.68□□□□□ -1.53e-7■■■□□ 17.9
XRN1-201ENST00000264951 TMEM114B3SHH9 223 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 MGRN1O60291 552 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 CAND2O75155 1236 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 RPS6KA5O75582 802 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 RPLP2P05387 115 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 ZNF24P17028 368 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 GEMIN4P57678 1058 aaKnown RBP5.68□□□□□ -1.5
XRN1-201ENST00000264951 SPIRE1Q08AE8 756 aa5.68□□□□□ -1.5
XRN1-201ENST00000264951 POLA2Q14181 598 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms