RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 SOCS4Q8WXH5 440 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 C2orf40Q9H1Z8 148 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 ZNF236Q9UL36 1845 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 P4HA2O15460 535 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 RGS2P41220 211 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 IFI35P80217 286 aaPredicted RBP11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 MAP7D1Q3KQU3 841 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 LCA5Q86VQ0 697 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 PHC3Q8NDX5 983 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 OR6J1Q8NGC5 347 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 ASAP3Q8TDY4 903 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 P3H4Q92791 437 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 KCNN1Q92952 543 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 LUC7LQ9NQ29 371 aaKnown RBP11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 LRRC53A6NM62 1247 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 ASAP2O43150 1006 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 LGALS2P05162 132 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 BIRC3Q13489 604 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 MORN1Q5T089 497 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 C17orf99Q6UX52 265 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 HHIPL1Q96JK4 782 aa11.28□□□□□ -0.6
GTF3C2-201ENST00000264720 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 TNPO2O14787 897 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 MAGEB2O15479 319 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 RARAP10276 462 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 PON1P27169 355 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 RAPGEF1Q13905 1077 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 ZRSR2Q15696 482 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 RBM12BQ8IXT5 1001 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 GPD1LQ8N335 351 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 DNAJC1Q96KC8 554 aaKnown RBP11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 FAM129AQ9BZQ8 928 aa11.27□□□□□ -0.6
GTF3C2-201ENST00000264720 MYH10P35580 1976 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ANKRD63C9JTQ0 380 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 KRIT1O00522 736 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 NVLO15381 856 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 LDHAP00338 332 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 SERPINB3P29508 390 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 PLTPP55058 493 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 BPIFB4P59827 614 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 TNFAIP2Q03169 654 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ZNF268Q14587 947 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ASIC2Q16515 512 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 SNRNP35Q16560 246 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 KLHDC7AQ5VTJ3 777 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 LRRC8CQ8TDW0 803 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 BAP1Q92560 729 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 VTI1AQ96AJ9 217 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 CYTH2Q99418 400 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.618e-8■■■□□ 15.4
GTF3C2-201ENST00000264720 RAB17Q9H0T7 212 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 HAO1Q9UJM8 370 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 FOXO6A8MYZ6 492 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 EPHB6O15197 1021 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ADCY3O60266 1144 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 HOXC6P09630 235 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 SLC9A1P19634 815 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 PDE1CQ14123 709 aaPredicted RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 PALB2Q86YC2 1186 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 PRPF31Q8WWY3 499 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 TRIM51Q9BSJ1 452 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 KATNBL1Q9H079 304 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 NEUROG2Q9H2A3 272 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 ETNK2Q9NVF9 386 aa11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 PAIP2BQ9ULR5 123 aaKnown RBP11.27□□□□□ -0.61
GTF3C2-201ENST00000264720 COL1A2P08123 1366 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 GOLGA8IPA6NC78 632 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 GOLGA8JA6NMD2 632 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TISP43B9A030 160 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 ZNF263O14978 683 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 SERPING1P05155 500 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TRIM49P0CI25 452 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TRIM49CP0CI26 452 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 PTDSS1P48651 473 aaKnown RBP11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 PEX5P50542 639 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 ENPEPQ07075 957 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 UAP1Q16222 522 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 DGKDQ16760 1214 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 LMBRD2Q68DH5 695 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 METTL13Q8N6R0 699 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 PPFIBP2Q8ND30 876 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TMC2Q8TDI7 906 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 ERLEC1Q96DZ1 483 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TLR10Q9BXR5 811 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 GANQ9H2C0 597 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 KLHL14Q9P2G3 628 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 SUCLA2Q9P2R7 463 aaPredicted RBP11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 SALL4Q9UJQ4 1053 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 ADGRA3Q8IWK6 1321 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 SMAPO00193 183 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 TXNDC9O14530 226 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 BAG2O95816 211 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 UCHL3P15374 230 aa11.26□□□□□ -0.61
GTF3C2-201ENST00000264720 RFX1P22670 979 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms