RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 CNGA2Q16280 664 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 SCARA3Q6AZY7 606 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 TWF2Q6IBS0 349 aaKnown RBP10.63□□□□□ -0.71
SEC22C-201ENST00000264454 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 UNC93AQ86WB7 457 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 NOA1Q8NC60 698 aaKnown RBP10.63□□□□□ -0.71
SEC22C-201ENST00000264454 PPP1R13LQ8WUF5 828 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 ZNF560Q96MR9 790 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 TRAIPQ9BWF2 469 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 SENP6Q9GZR1 1112 aaPredicted RBP10.63□□□□□ -0.71
SEC22C-201ENST00000264454 MIS12Q9H081 205 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 NXF3Q9H4D5 531 aaKnown RBP10.63□□□□□ -0.71
SEC22C-201ENST00000264454 HMX1Q9NP08 348 aaPredicted RBP10.63□□□□□ -0.71
SEC22C-201ENST00000264454 SLC38A7Q9NVC3 462 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 PARP2Q9UGN5 583 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 ST3GAL5Q9UNP4 418 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 IPPQ9Y573 584 aa10.63□□□□□ -0.71
SEC22C-201ENST00000264454 SPOPO43791 374 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 CHRNA1P02708 482 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 RHOXF2BP0C7M4 288 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SKIP12755 728 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 CD19P15391 556 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 COMTP21964 271 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 RRM1P23921 792 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 BRD2P25440 801 aaKnown RBP10.62□□□□□ -0.71
SEC22C-201ENST00000264454 RAB27AP51159 221 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ACLYP53396 1101 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 CAP1Q01518 475 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 PTP4A2Q12974 167 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 MAP9Q49MG5 647 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ZNF394Q53GI3 561 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SGO2Q562F6 1265 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 FAM26DQ5JW98 314 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 C9orf57Q5W0N0 161 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 DPH6Q7L8W6 267 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ERICH1Q86X53 443 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SLC4A11Q8NBS3 891 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SMG8Q8ND04 991 aaKnown RBP10.62□□□□□ -0.71
SEC22C-201ENST00000264454 WHAMMQ8TF30 809 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 CD101Q93033 1021 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 MS4A14Q96JA4 679 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 GLT1D1Q96MS3 346 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ZMAT2Q96NC0 199 aaKnown RBP10.62□□□□□ -0.71
SEC22C-201ENST00000264454 RHOXF2Q9BQY4 288 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ZSWIM1Q9BR11 485 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 NT5C1AQ9BXI3 368 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SDCBP2Q9H190 292 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 GOLPH3Q9H4A6 298 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ARFGAP3Q9NP61 516 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 GDAP2Q9NXN4 497 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 WDR35Q9P2L0 1181 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 ANAPC7Q9UJX3 599 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 TMEM59LQ9UK28 342 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.62□□□□□ -0.71
SEC22C-201ENST00000264454 PCDHA3Q9Y5H8 950 aa10.62□□□□□ -0.71
SEC22C-201ENST00000264454 RALGAPA2Q2PPJ7 1873 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 GRIN2DO15399 1336 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 PIRO00625 290 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 ZNF623O75123 536 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 CALCAP01258 141 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 ITGA4P13612 1032 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 PAX3P23760 479 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 AKAP5P24588 427 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 LRPAP1P30533 357 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 MAN1A1P33908 653 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 CTNNA1P35221 906 aaKnown RBP10.61□□□□□ -0.71
SEC22C-201ENST00000264454 THPOP40225 353 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 DNA2P51530 1060 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 CLCN6P51797 869 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 CDH8P55286 799 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 GSCP56915 257 aaPredicted RBP10.61□□□□□ -0.71
SEC22C-201ENST00000264454 RWDD2BP57060 319 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 SNX16P57768 344 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 C2orf54Q08AI8 447 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 MAMLD1Q13495 774 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 SV2CQ496J9 727 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 FBXO47Q5MNV8 452 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 MRPL10Q7Z7H8 261 aaKnown RBP10.61□□□□□ -0.71
SEC22C-201ENST00000264454 PASD1Q8IV76 773 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.61□□□□□ -0.71
SEC22C-201ENST00000264454 FEZF2Q8TBJ5 459 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 TFAP2BQ92481 460 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 HEXIM2Q96MH2 286 aaKnown RBP10.61□□□□□ -0.71
SEC22C-201ENST00000264454 C11orf70Q9BRQ4 267 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 APOL6Q9BWW8 343 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 SMYD3Q9H7B4 428 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 UBN1Q9NPG3 1134 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 FAM105AQ9NUU6 356 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 IP6K2Q9UHH9 426 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 GIT1Q9Y2X7 761 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 HES2Q9Y543 173 aa10.61□□□□□ -0.71
SEC22C-201ENST00000264454 CITO14578 2027 aa10.6□□□□□ -0.71
SEC22C-201ENST00000264454 GOLGA6L10A0A0M3HER8 536 aa10.6□□□□□ -0.71
SEC22C-201ENST00000264454 TMEM110-MUSTN1A8MSY1 372 aa10.6□□□□□ -0.71
SEC22C-201ENST00000264454 KPNA7A9QM74 516 aa10.6□□□□□ -0.71
SEC22C-201ENST00000264454 ATMINO43313 823 aaPredicted RBP10.6□□□□□ -0.71
SEC22C-201ENST00000264454 PROSCO94903 275 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms