RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 FAM71DQ8N9W8 422 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 TSNARE1Q96NA8 513 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 SMARCAD1Q9H4L7 1026 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 CCDC78A2IDD5 438 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 CREB3O43889 395 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 APRTP07741 180 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 SDC4P31431 198 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 JAM2P57087 298 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 TGFB2P61812 414 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 MYBPC2Q14324 1141 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 HIF1AQ16665 826 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 MFSD7Q6UXD7 560 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 NIPA1Q7RTP0 329 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
HERC6-201ENST00000264346 I3L4J1 428 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 M0QZ92 97 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 B4GALT5O43286 388 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 PROSCO94903 275 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 MYL3P08590 195 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 RARBP10826 455 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 CA8P35219 290 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 NUMBP49757 651 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ARL4CP56559 192 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 PDE1BQ01064 536 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 HSDL1Q3SXM5 330 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 CFAP157Q5JU67 520 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 SLC9A9Q8IVB4 645 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 PLEKHO2Q8TD55 490 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 STRIP2Q9ULQ0 834 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ZNF536O15090 1300 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 NME3Q13232 169 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 TRIM68Q6AZZ1 485 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 AFG1LQ8WV93 481 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.23□□□□□ -0.29
HERC6-201ENST00000264346 HPDLQ96IR7 371 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 MTFR1LQ9H019 292 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 RAB6BQ9NRW1 208 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 KAT6AQ92794 2004 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 AHDC1Q5TGY3 1603 aaPredicted RBP13.23□□□□□ -0.29
HERC6-201ENST00000264346 CCDC195A0A1B0GUA6 201 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 H0Y3Z8 333 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 STK10O94804 968 aaKnown RBP13.23□□□□□ -0.29
HERC6-201ENST00000264346 KRT7P08729 469 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ARL1P40616 181 aaPredicted RBP13.23□□□□□ -0.29
HERC6-201ENST00000264346 SNX16P57768 344 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 TMEM132DQ14C87 1099 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 SNCBQ16143 134 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 CATSPERGQ6ZRH7 1159 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 DNAAF3Q8N9W5 541 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ASCC2Q9H1I8 757 aaPredicted RBP13.23□□□□□ -0.29
HERC6-201ENST00000264346 PIN4Q9Y237 131 aaKnown RBP13.23□□□□□ -0.29
HERC6-201ENST00000264346 INPP5FQ9Y2H2 1132 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 PCDHA3Q9Y5H8 950 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 ZMYM2Q9UBW7 1377 aa13.23□□□□□ -0.29
HERC6-201ENST00000264346 TIAM2Q8IVF5 1701 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 E2F8A0AVK6 867 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 KIAA0391O15091 583 aaKnown RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 DHX15O43143 795 aaKnown RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 KITP10721 976 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 RFC5P40937 340 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 NOVP48745 357 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 HIRAP54198 1017 aaPredicted RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 DNAJC3Q13217 504 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 LGSNQ5TDP6 509 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 SMYD2Q9NRG4 433 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ASNSD1Q9NWL6 643 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 G3BP2Q9UN86 482 aaKnown RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 KCNN4O15554 427 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 NPTXRO95502 500 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 AGTP01019 485 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 CTSHP09668 335 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 INSRRP14616 1297 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 MMP14P50281 582 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 FSTL1Q12841 308 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 AGBL2Q5U5Z8 902 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 TRABDQ9H4I3 376 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
HERC6-201ENST00000264346 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 A0A1B0GUA9 196 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ADCY3O60266 1144 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 CST3P01034 146 aaPredicted RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 SNRPFP62306 86 aaKnown RBP13.22□□□□□ -0.29
HERC6-201ENST00000264346 CAPSQ13938 189 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ANKRD13AQ8IZ07 590 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 MAML1Q92585 1016 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 FAM167BQ9BTA0 163 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 XPNPEP1Q9NQW7 623 aa13.22□□□□□ -0.29
HERC6-201ENST00000264346 ERAP1Q9NZ08 941 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms