RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TMEM8AQ9HCN3 771 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 USE1Q9NZ43 259 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 USP42Q9H9J4 1324 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 SOX6P35712 828 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 UBE3AQ05086 875 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 GPR101Q96P66 508 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 RPAP3Q9H6T3 665 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 KLHL11Q9NVR0 708 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PCDHB2Q9Y5E7 798 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 ASB14A6NK59 587 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 C21orf2O43822 256 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 GUCA1CO95843 209 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 CENPCQ03188 943 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 SRBD1Q8N5C6 995 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 MOCS2O96007 188 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 NPEPPSP55786 919 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 EPHA10Q5JZY3 1008 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 TMEM154Q6P9G4 183 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 SLC38A7Q9NVC3 462 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 H2AFY2Q9P0M6 372 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 EXOSC10Q01780 885 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 LRRC74AQ0VAA2 488 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 SH2D3CQ8N5H7 860 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 VPS37AQ8NEZ2 397 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PLEKHA8Q96JA3 519 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 SERPINB12Q96P63 405 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 MARCOQ9UEW3 520 aaPredicted RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 M0R3G1 203 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PSMA4P25789 261 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PTK6Q13882 451 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 C3orf20Q8ND61 904 aa18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 PRPF18Q99633 342 aaKnown RBP18.24■□□□□ 0.51
NOTCH3-201ENST00000263388 DLG5Q8TDM6 1919 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 TBX3O15119 743 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 USP10Q14694 798 aaKnown RBP18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 GINS4Q9BRT9 223 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 LATS2Q9NRM7 1088 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 PPLO60437 1756 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 REEP2Q9BRK0 252 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 EPC1Q9H2F5 836 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 CCDC88AQ3V6T2 1871 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 SUPT3HB4E1H0 165 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 AIM2O14862 343 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 TRIP4Q15650 581 aaPredicted RBP18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 NSL1Q96IY1 281 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 MYO1GB0I1T2 1018 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 KIF28PB7ZC32 967 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 PRKCBP05771 671 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 TMEM117Q9H0C3 514 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 RBM12Q9NTZ6 932 aaKnown RBP18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 TMEM191CA6NGB0 347 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 WLSQ5T9L3 541 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 LVRNQ6Q4G3 990 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 PHF20Q9BVI0 1012 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 ISCUQ9H1K1 167 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 SYBUQ9NX95 663 aa18.23■□□□□ 0.51
NOTCH3-201ENST00000263388 CCDC103Q8IW40 242 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 SCFD2Q8WU76 684 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 AGPAT5Q9NUQ2 364 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 DCDC2Q9UHG0 476 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 TRPC5OSA6NMA1 111 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 EVPLLA8MZ36 301 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 NT5C1AQ9BXI3 368 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 NPHP3-ACAD11A0A0J9YXS1 232 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 PDGFRAP16234 1089 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 UGT3A1Q6NUS8 523 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 STKLD1Q8NE28 680 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CNDP1Q96KN2 507 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 STAT5BP51692 787 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 ELOA2Q8IYF1 753 aaPredicted RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CCT7Q99832 543 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CD274Q9NZQ7 290 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 GEMIN4P57678 1058 aaKnown RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 FAM83EQ2M2I3 478 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 ZNF609O15014 1411 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 PHF20L1A8MW92 1017 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CAND2O75155 1236 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 SRP72O76094 671 aaKnown RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CCZ1BP86790 482 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 CCZ1P86791 482 aaPredicted RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 RGL1Q9NZL6 768 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 AKT1P31749 480 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 HPCAP84074 193 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 SMAD1Q15797 465 aaKnown RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 ADSSL1Q8N142 457 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 KCNF1Q9H3M0 494 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 SMARCAD1Q9H4L7 1026 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 ADGRA2Q96PE1 1338 aa18.22■□□□□ 0.51
NOTCH3-201ENST00000263388 MAGEA4P43358 317 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 COPAP53621 1224 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 KYNUQ16719 465 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 DIS3LQ8TF46 1054 aaKnown RBP18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 RIC8BQ9NVN3 520 aa18.21■□□□□ 0.51
NOTCH3-201ENST00000263388 MAGEB2O15479 319 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms