RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 CCNG2Q16589 344 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 BBS9Q3SYG4 887 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 MSS51Q4VC12 460 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CROCCP2Q86T23 111 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 USP37Q86T82 979 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 DEPTORQ8TB45 409 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ZNF606Q8WXB4 792 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 MAGEB18Q96M61 343 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 MTMR12Q9C0I1 747 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 RXFP1Q9HBX9 757 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 JPH1Q9HDC5 661 aaPredicted RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CHKBQ9Y259 395 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 A0A0G2JND7 137 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 TCRBV7S3A2A0A539 114 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 LIASO43766 372 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ZBED4O75132 1171 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 C4BPAP04003 597 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 GJB1P08034 283 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 GSTA1P08263 222 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ACO1P21399 889 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 ADRA1DP25100 572 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 EPHB2P29323 1055 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 PEX19P40855 299 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 TFAMQ00059 246 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 NCOA4Q13772 614 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 SEPT7Q16181 437 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 ZACNQ401N2 412 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 GALNTL6Q49A17 601 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 LVRNQ6Q4G3 990 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 ANKRD35Q8N283 1001 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 FEZF2Q8TBJ5 459 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 TMC2Q8TDI7 906 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 LRRC8CQ8TDW0 803 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 UTP4Q969X6 686 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 RSRC1Q96IZ7 334 aaKnown RBP9.64□□□□□ -0.87
MSH4-201ENST00000263187 ZNF570Q96NI8 536 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 SMC6Q96SB8 1091 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 ATP6V0A4Q9HBG4 840 aa9.64□□□□□ -0.87
MSH4-201ENST00000263187 F5H423 210 aaPredicted RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 EXTL3O43909 919 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 KRT19P08727 400 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 KLRC2P26717 231 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 MYL6P60660 151 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 CENPCQ03188 943 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 ZNF252P-AS1Q0IIN9 211 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 EMC2Q15006 297 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 TCEAL1Q15170 157 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 MTFR1Q15390 333 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 TMEM132AQ24JP5 1023 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 DNAJC24Q6P3W2 148 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 DLK2Q6UY11 383 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 RHPN2Q8IUC4 686 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 TTC8Q8TAM2 541 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 MAML1Q92585 1016 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 VTI1AQ96AJ9 217 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 LRRC37BQ96QE4 947 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 SENP7Q9BQF6 1050 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 C15orf41Q9Y2V0 281 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 VWA5AO00534 786 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 ENTPD5O75356 428 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 CYP1A1P04798 512 aaPredicted RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 POTEJP0CG39 1038 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 CDH8P55286 799 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 LACTBP83111 547 aaPredicted RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 ATP11AP98196 1134 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 CNTN2Q02246 1040 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 ZNF268Q14587 947 aaPredicted RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 SETDB1Q15047 1291 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 WDR72Q3MJ13 1102 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 FNBP1LQ5T0N5 605 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 NBPF12Q5TAG4 269 aaPredicted RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 STYK1Q6J9G0 422 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 MTDHQ86UE4 582 aaKnown RBP9.63□□□□□ -0.87
MSH4-201ENST00000263187 TRABD2AQ86V40 505 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 THNSL1Q8IYQ7 743 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 HSPH1Q92598 858 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 ATP6V0A1Q93050 837 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 SLITRK1Q96PX8 696 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 ANKEF1Q9NU02 776 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 GINM1Q9NU53 330 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 SLC9A2Q9UBY0 812 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
MSH4-201ENST00000263187 CFAP73A6NFT4 308 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 AVILO75366 819 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 PDHA1P08559 390 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 SLC1A1P43005 524 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 FKBP1AP62942 108 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 CXCL9Q07325 125 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 STAT4Q14765 748 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 TAF1BQ53T94 588 aaPredicted RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 ZC3H18Q86VM9 953 aaKnown RBP9.62□□□□□ -0.87
MSH4-201ENST00000263187 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
MSH4-201ENST00000263187 FBF1Q8TES7 1133 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms