RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 PPFIA4O75335 1185 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 C22orf31O95567 290 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 ARF4P18085 180 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 POLR2BP30876 1174 aaKnown RBP18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 RFC1P35251 1148 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 MCL1Q07820 350 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 TAF5Q15542 800 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 TAPT1Q6NXT6 567 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 C12orf29Q8N999 325 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 XYLT2Q9H1B5 865 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 CDHR5Q9HBB8 845 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 PCYOX1Q9UHG3 505 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 FSCN2O14926 492 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 MAP3K6O95382 1288 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 ASPAP45381 313 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 IFNAR2P48551 515 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 SEC14L1Q92503 715 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 ATP8B3O60423 1300 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 PASKQ96RG2 1323 aa18.15■□□□□ 0.5
RHBDF1-201ENST00000262316 BHMG1C9JSJ3 638 aaPredicted RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 ADCY6O43306 1168 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 ATP2C2O75185 946 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 PPFIA2O75334 1257 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 LGR5O75473 907 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 CREB1P16220 341 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 RGS7P49802 495 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 ZNF667Q5HYK9 610 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 PLPPR4Q7Z2D5 763 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 HEXIM2Q96MH2 286 aaKnown RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 DCLK3Q9C098 648 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 PARVAQ9NVD7 372 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 ZNF148Q9UQR1 794 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 H3BRB1 525 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 DYNC1LI2O43237 492 aaPredicted RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 MMP8P22894 467 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 MDH1P40925 334 aaKnown RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 TFDP1Q14186 410 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 CDO1Q16878 200 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 PTPN20Q4JDL3 420 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 SH3PXD2AQ5TCZ1 1133 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 RHOT1Q8IXI2 618 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 FZD8Q9H461 694 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 TUT1Q9H6E5 874 aaKnown RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 MTRF1LQ9UGC7 380 aaKnown RBP18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 DNPEPQ9ULA0 475 aa18.14■□□□□ 0.49
RHBDF1-201ENST00000262316 IGKV6-21A0A0C4DH24 114 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 IVLP07476 585 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 SESTD1Q86VW0 696 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 BRI3BPQ8WY22 251 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 PABPC3Q9H361 631 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 MROH8Q9H579 483 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 MRPL47Q9HD33 250 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 HMGB1P1B2RPK0 211 aaPredicted RBP18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 MYO1CO00159 1063 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 PPEF2O14830 753 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 PSMC1P62191 440 aaKnown RBP18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 MTMR3Q13615 1198 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 LRRC14Q15048 493 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 CDCA2Q69YH5 1023 aaPredicted RBP18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 KDM7AQ6ZMT4 941 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 TSHZ1Q6ZSZ6 1077 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 TMEM35BQ8NCS4 154 aa18.13■□□□□ 0.49
RHBDF1-201ENST00000262316 PTPRFP10586 1907 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 PODXLO00592 558 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 SHOX2O60902 331 aaPredicted RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 SNAI1O95863 264 aaPredicted RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 CD48P09326 243 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 SLC10A6Q3KNW5 377 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 PLEKHA7Q6IQ23 1121 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 ZNF365Q70YC5 407 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 TAX1BP1Q86VP1 789 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 ZNF677Q86XU0 584 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 CD302Q8IX05 232 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 CCDC33Q8N5R6 958 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 CPXM1Q96SM3 734 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 PLVAPQ9BX97 442 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 PTPRHQ9HD43 1115 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 AVENQ9NQS1 362 aaPredicted RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 KLK14Q9P0G3 267 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 BANF1O75531 89 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 MYCNP04198 464 aaPredicted RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 NFX1Q12986 1120 aaKnown RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 CDC42EP4Q9H3Q1 356 aaKnown RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 ANAPC5Q9UJX4 755 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 SMPD1P17405 629 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 PSMA2P25787 234 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 ZNF200P98182 395 aaPredicted RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 RUFY4Q6ZNE9 571 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 SRLQ86TD4 932 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 HSPH1Q92598 858 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 TMEM121Q9BTD3 319 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 ELOVL4Q9GZR5 314 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 METTL5Q9NRN9 209 aaKnown RBP18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 FAM49BQ9NUQ9 324 aa18.12■□□□□ 0.49
RHBDF1-201ENST00000262316 TMEM191CA6NGB0 347 aa18.11■□□□□ 0.49
RHBDF1-201ENST00000262316 TP73O15350 636 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms