RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 PLPPR4Q7Z2D5 763 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 NECAB2Q7Z6G3 386 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 RPRD1AQ96P16 312 aaPredicted RBP14.61□□□□□ -0.07
CDH1-201ENST00000261769 TMEM117Q9H0C3 514 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 KCNN4O15554 427 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 CSDE1O75534 798 aaKnown RBP14.61□□□□□ -0.07
CDH1-201ENST00000261769 USP2O75604 605 aaPredicted RBP14.61□□□□□ -0.07
CDH1-201ENST00000261769 EIF4BP23588 611 aaKnown RBP14.61□□□□□ -0.07
CDH1-201ENST00000261769 SLC7A5Q01650 507 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 NSUN2Q08J23 767 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDH1-201ENST00000261769 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.07
CDH1-201ENST00000261769 KCTD16Q68DU8 428 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 SLAIN1Q8ND83 568 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 GTF3C4Q9UKN8 822 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 MTA1Q13330 715 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 SLC12A1Q13621 1099 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 DBN1Q16643 649 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 PRAMEF19Q5SWL8 479 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
CDH1-201ENST00000261769 TRIM65Q6PJ69 517 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 SNF8Q96H20 258 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 SYT15Q9BQS2 421 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 NMRK2Q9NPI5 230 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 NFU1Q9UMS0 254 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 FRMPD4Q14CM0 1322 aa14.61□□□□□ -0.07
CDH1-201ENST00000261769 SETSIPP0DME0 302 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 RALBP11234 206 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 EPHB2P29323 1055 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 SH2D4BQ5SQS7 431 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 FAM171A1Q5VUB5 890 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 C1orf131Q8NDD1 294 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 DEFB118Q96PH6 123 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 INTUQ9ULD6 942 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 GOLGA8MH3BSY2 632 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 M0QYT0 321 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 MIB1Q86YT6 1006 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 MSL3Q8N5Y2 521 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 ZBTB18Q99592 522 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 EGFL8Q99944 293 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 FBXO44Q9H4M3 255 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 TMCC1O94876 653 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 TUFMP49411 452 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 ARSEP51690 589 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 LBX2Q6XYB7 198 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 SPATS2Q86XZ4 545 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 PPM1NQ8N819 430 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 DDX47Q9H0S4 455 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 HPSEQ9Y251 543 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 PSMC6P62333 389 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 CDR2Q01850 454 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 TWF1Q12792 350 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 CENPPQ6IPU0 288 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 C4orf22Q6V702 233 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 HASPINQ8TF76 798 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 C1orf54Q8WWF1 131 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 VPS11Q9H270 941 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 METTL5Q9NRN9 209 aaKnown RBP14.6□□□□□ -0.07
CDH1-201ENST00000261769 INTS13Q9NVM9 706 aa14.6□□□□□ -0.07
CDH1-201ENST00000261769 ATP9BO43861 1147 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 PAX3P23760 479 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 MRPS6P82932 125 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 POLD3Q15054 466 aaPredicted RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 IZUMO3Q5VZ72 239 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 ACAD10Q6JQN1 1059 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CDC26Q8NHZ8 85 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 FOPNLQ96NB1 174 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 TMEM51Q9NW97 253 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 THG1LQ9NWX6 298 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 FIS1Q9Y3D6 152 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CCDC160A6NGH7 325 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 RNASEH1O60930 286 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 SMIM10L2AP0DMW4 78 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 SMIM10L2BP0DMW5 78 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 MYL6P60660 151 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 PDIA2Q13087 525 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 UGP2Q16851 508 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 TREML2Q5T2D2 321 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 THEMIS2Q5TEJ8 643 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 TBC1D19Q8N5T2 526 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 PORCNQ9H237 461 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 DDX43Q9NXZ2 648 aaKnown RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 HACD3Q9P035 362 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 KIF13AQ9H1H9 1805 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 A0A087WUV0 522 aaPredicted RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 SV2AQ7L0J3 742 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 TMEM176AQ96HP8 235 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CENPKQ9BS16 269 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 KRT82Q9NSB4 513 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 ZNF212Q9UDV6 495 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 IFT172Q9UG01 1749 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 NCK2O43639 380 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 EFCAB14O75071 495 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 HSPA4LO95757 839 aa14.59□□□□□ -0.07
CDH1-201ENST00000261769 PTPN11Q06124 597 aaPredicted RBP14.59□□□□□ -0.07
CDH1-201ENST00000261769 DUSP28Q4G0W2 176 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms