RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RBAK-RBAKDNI3L0D1 243 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 DLATP10515 647 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 TRIM21P19474 475 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 CCND1P24385 295 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 CDK7P50613 346 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 ARHGAP22Q7Z5H3 698 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 BRSK2Q8IWQ3 736 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 SPATA4Q8NEY3 305 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 FAM81AQ8TBF8 368 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 HDAC7Q8WUI4 952 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 POP1Q99575 1024 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 FAM207AQ9NSI2 230 aaPredicted RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 NOC2LQ9Y3T9 749 aaKnown RBP20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 TANC1Q9C0D5 1861 aa20.11■□□□□ 0.81
COL4A3BP-201ENST00000261415 ZNF185O15231 689 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 AXLP30530 894 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 GCLMP48507 274 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 MNX1P50219 401 aaPredicted RBP20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 MYL7Q01449 175 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 TSR1Q2NL82 804 aaKnown RBP20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 NOTUMQ6P988 496 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 CREG2Q8IUH2 290 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 TTYH3Q9C0H2 523 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 TOPORSQ9NS56 1045 aaPredicted RBP20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 GCNT4Q9P109 453 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 SMIM24O75264 130 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 PYGLP06737 847 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 ALADP13716 330 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 OSTNP61366 133 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 ZNF268Q14587 947 aaPredicted RBP20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 EXOC3L4Q17RC7 722 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 SLC27A1Q6PCB7 646 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 FNBP1Q96RU3 617 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 LMCD1Q9NZU5 365 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 SNX12Q9UMY4 172 aa20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
COL4A3BP-201ENST00000261415 EPHB6O15197 1021 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 CLDN10P78369 228 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 DCAF4L1Q3SXM0 396 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 FIGNQ5HY92 759 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 C1QTNF12Q5T7M4 302 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 DTNBP1Q96EV8 351 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 EPAS1Q99814 870 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 LSM14BQ9BX40 385 aaKnown RBP20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 TMEM117Q9H0C3 514 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 GOLGA6L10A0A0M3HER8 536 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 TTC26A0AVF1 554 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 RNF225M0QZC1 329 aaPredicted RBP20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 PAEPP09466 180 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 MXI1P50539 228 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 HHATQ5VTY9 493 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 FAM126BQ8IXS8 530 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 TMEM192Q8IY95 271 aa20.09■□□□□ 0.81
COL4A3BP-201ENST00000261415 SLC9A1P19634 815 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 PON1P27169 355 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 CCNG1P51959 295 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 ENOX2Q16206 610 aaKnown RBP20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 FAM26DQ5JW98 314 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 ZNF618Q5T7W0 954 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 MAATS1Q7Z4T9 603 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 CHP1Q99653 195 aa20.08■□□□□ 0.81
COL4A3BP-201ENST00000261415 PTPRJQ12913 1337 aa20.08■□□□□ 0.8
COL4A3BP-201ENST00000261415 CCT8L1PA6NM43 557 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 P4HA2O15460 535 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 DIAPH2O60879 1101 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 NPTXRO95502 500 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 STAG3L1P0CL83 205 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CKBP12277 381 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 TNNI1P19237 187 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 GTF2H1P32780 548 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 LRIG3Q6UXM1 1119 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 APBB1IPQ7Z5R6 666 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 ANKS4BQ8N8V4 417 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 IQCDQ96DY2 449 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 EIF2AQ9BY44 585 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 TSGA10Q9BZW7 698 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 TMBIM4Q9HC24 238 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 TMEM8AQ9HCN3 771 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CAPN11Q9UMQ6 739 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 SCN5AQ14524 2016 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 LRRD1A4D1F6 860 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 PMM2O15305 246 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CLTAP09496 248 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CXCL8P10145 99 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 TCP1P17987 556 aaKnown RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CYLC1P35663 651 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 GJA8P48165 433 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 KYAT1Q16773 422 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 LRRC23Q53EV4 343 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 FBXO47Q5MNV8 452 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 LMBRD2Q68DH5 695 aaPredicted RBP20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 KRT39Q6A163 491 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 C8orf74Q6P047 294 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 WHAMMQ8TF30 809 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 CGRRF1Q99675 332 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 SLC12A6Q9UHW9 1150 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 ST3GAL5Q9UNP4 418 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 L3MBTL1Q9Y468 752 aa20.07■□□□□ 0.8
COL4A3BP-201ENST00000261415 PDLIM1O00151 329 aa20.06■□□□□ 0.8
COL4A3BP-201ENST00000261415 NOL4O94818 638 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms