RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 GDI1P31150 447 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 TFAMQ00059 246 aaKnown RBP20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 WSCD1Q658N2 575 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 SCARA3Q6AZY7 606 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 DNAJB7Q7Z6W7 309 aaPredicted RBP20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 METTL23Q86XA0 190 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 MAML2Q8IZL2 1156 aaPredicted RBP20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 LINC00301Q8NCQ3 95 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 KCNG4Q8TDN1 519 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 BORCS6Q96GS4 357 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 SEPT5Q99719 369 aaPredicted RBP20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 PCIF1Q9H4Z3 704 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 OLFML3Q9NRN5 406 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 PCDHB13Q9Y5F0 798 aa20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 MORC2Q9Y6X9 1032 aaPredicted RBP20.54■□□□□ 0.88
TM6SF1-201ENST00000258909 FRMD3A2A2Y4 597 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 SHISA7A6NL88 538 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 IL18RAPO95256 599 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 PSMC3P17980 439 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 PAX3P23760 479 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 FOXD4L6Q3SYB3 417 aaPredicted RBP20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 FOXD4L3Q6VB84 417 aaPredicted RBP20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 LRRTM3Q86VH5 581 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 GLIS3Q8NEA6 775 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 HPS3Q969F9 1004 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 RSPRY1Q96DX4 576 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 LPIN3Q9BQK8 851 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 CBWD1Q9BRT8 395 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 ZCWPW1Q9H0M4 648 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 DSEQ9UL01 958 aa20.53■□□□□ 0.88
TM6SF1-201ENST00000258909 KPNA7A9QM74 516 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 SPTLC2O15270 562 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 POU5F1Q01860 360 aaKnown RBP20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 MGAT5BQ3V5L5 792 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 ZNF852Q6ZMS4 543 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 BRSK2Q8IWQ3 736 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 FAM200AQ8TCP9 573 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 DNASE1L2Q92874 299 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 OSBPL6Q9BZF3 934 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 ATXN3LQ9H3M9 355 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 RBAKQ9NYW8 714 aaPredicted RBP20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 NDRG2Q9UN36 371 aaKnown RBP20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 PATJQ8NI35 1801 aa20.52■□□□□ 0.88
TM6SF1-201ENST00000258909 HEPACAM2A8MVW5 462 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 ITGB3P05106 788 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 POLR2BP30876 1174 aaKnown RBP20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 SV2CQ496J9 727 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 GAREM2Q75VX8 874 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 THEM5Q8N1Q8 247 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 IRF7Q92985 503 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 PSMG2Q969U7 264 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 TRPV4Q9HBA0 871 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 AGAP1Q9UPQ3 857 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 FANCMQ8IYD8 2048 aa20.51■□□□□ 0.87
TM6SF1-201ENST00000258909 LAMTOR5O43504 91 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ATF6P18850 670 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 GARTP22102 1010 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 GABRR2P28476 465 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 FZD5Q13467 585 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 NT5DC4Q86YG4 428 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 MFSD6LQ8IWD5 586 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 CCDC65Q8IXS2 484 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 C1orf127Q8N9H9 656 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 GIPC2Q8TF65 315 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ZNF396Q96N95 335 aaPredicted RBP20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 GPR88Q9GZN0 384 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ABI2Q9NYB9 513 aaPredicted RBP20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ASB3Q9Y575 518 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 COL4A2P08572 1712 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ZNF263O14978 683 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 LDHAP00338 332 aaKnown RBP20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 TUFMP49411 452 aaKnown RBP20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ALCAMQ13740 583 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 E2F4Q16254 413 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ARID3BQ8IVW6 561 aaPredicted RBP20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 DEPDC1BQ8WUY9 529 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 DHX58Q96C10 678 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 NELL2Q99435 816 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 MKNK1Q9BUB5 465 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 PDE11AQ9HCR9 933 aa20.5■□□□□ 0.87
TM6SF1-201ENST00000258909 EXTL3O43909 919 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 PPP6R2O75170 966 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 LMNAP02545 664 aaKnown RBP20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 CYP4F8P98187 520 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 CSTF1Q05048 431 aaKnown RBP20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 GPR158Q5T848 1215 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 LMBRD2Q68DH5 695 aaPredicted RBP20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 SHC4Q6S5L8 630 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 ITIH5Q86UX2 942 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 CSGALNACT2Q8N6G5 542 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 CLDN23Q96B33 292 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 TMEM206Q9H813 350 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 TMLHEQ9NVH6 421 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 HSFX1Q9UBD0 423 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 MRPS17Q9Y2R5 130 aaKnown RBP20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 PIAS3Q9Y6X2 628 aa20.49■□□□□ 0.87
TM6SF1-201ENST00000258909 NCAM2O15394 837 aa20.48■□□□□ 0.87
TM6SF1-201ENST00000258909 KRT19P08727 400 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms