RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 IGSF9BQ9UPX0 1349 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 UBA6A0AVT1 1052 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ENO4A6NNW6 628 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 AIM2O14862 343 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TM9SF1O15321 606 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 USP1O94782 785 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 P4HBP07237 508 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FDX1P10109 184 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FCER1AP12319 257 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NQO1P15559 274 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ADORA2BP29275 332 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DALRD3Q5D0E6 543 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 USPL1Q5W0Q7 1092 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 E4F1Q66K89 784 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SNRNP48Q6IEG0 339 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TFB1MQ8WVM0 346 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ZFP42Q96MM3 310 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ERP44Q9BS26 406 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GOLPH3Q9H4A6 298 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CATSPERBQ9H7T0 1116 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 IMPAD1Q9NX62 359 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ITGB1BP2Q9UKP3 347 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NDUFS3O75489 264 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ATP5BP06576 529 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ENO3P13929 434 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CALB2P22676 271 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 PSMA3P25788 255 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 RGS4P49798 205 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ACTR2P61160 394 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TRIP10Q15642 601 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 C12orf60Q5U649 245 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GALNT4Q8N4A0 578 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 AGR3Q8TD06 166 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 P4HA2O15460 535 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 EIF2S1P05198 315 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TARSP26639 723 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GNL1P36915 607 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FDFT1P37268 417 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 KCNK10P57789 538 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NCOA4Q13772 614 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NCF4Q15080 339 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SNRNP35Q16560 246 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ARMCX4Q5H9R4 360 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 PRMT9Q6P2P2 845 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 FAM196AQ6ZSG2 479 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SCN4BQ8IWT1 228 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SCUBE1Q8IWY4 988 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 APPL2Q8NEU8 664 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DDX17Q92841 729 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CNTFP26441 200 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CASP1P29466 404 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 RAD51Q06609 339 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 BARGINQ6ZT62 677 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GLYCTKQ8IVS8 523 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 UNC45BQ8IWX7 931 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 USP38Q8NB14 1042 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 WNK4Q96J92 1243 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 PPP1R16BQ96T49 567 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ZCCHC17Q9NP64 241 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CD274Q9NZQ7 290 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 GABBR1Q9UBS5 961 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SFMBT1Q9UHJ3 866 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 LZTS1Q9Y250 596 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DDX60Q8IY21 1712 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NEURL4Q96JN8 1562 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF197O14709 1029 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 RAD51CO43502 376 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CAND2O75155 1236 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 BRD2P25440 801 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 HSD17B3P37058 310 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 MAGEA4P43358 317 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CRKP46108 304 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 NCALDP61601 193 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CHI3L2Q15782 390 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TRMT5Q32P41 509 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 JAMLQ86YT9 394 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF507Q8TCN5 953 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TASP1Q9H6P5 420 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM8AQ9HCN3 771 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ALG13Q9NP73 1137 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 SLC38A7Q9NVC3 462 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 H2AFY2Q9P0M6 372 aaPredicted RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 DBR1Q9UK59 544 aaKnown RBP5.01□□□□□ -1.61
RC3H1-201ENST00000258349 CLCA2Q9UQC9 943 aa5.01□□□□□ -1.61
RC3H1-201ENST00000258349 ROBO2Q9HCK4 1378 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 PEX5P50542 639 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 PI16Q6UXB8 463 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SH2D3CQ8N5H7 860 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ZNF280CQ8ND82 737 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RXFP1Q9HBX9 757 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 FAM217BQ9NTX9 383 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 MARCOQ9UEW3 520 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 HERC5Q9UII4 1024 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 GRID1Q9ULK0 1009 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L15C9J2P7 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L13C9JLJ4 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L11C9JVI0 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L18D6R9N7 530 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms