RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 SPATA33Q96N06 139 aa17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 PPP1R16BQ96T49 567 aa17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 MINDY3Q9H8M7 445 aa17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 NXF1Q9UBU9 619 aaKnown RBP17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 IP6K2Q9UHH9 426 aa17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 CAPN7Q9Y6W3 813 aa17.52■□□□□ 0.4
UBQLN1-201ENST00000257468 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 TCRBV5S1A1TA0A578 114 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ITGBL1O95965 494 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ZSCAN5DPP0CG00 497 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 PSMC4P43686 418 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ASPAP45381 313 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 CDR1P51861 262 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ZNF699Q32M78 642 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 SYDE1Q6ZW31 735 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 GSTA5Q7RTV2 222 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 CENPTQ96BT3 561 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 FAM167AQ96KS9 214 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ZNF317Q96PQ6 595 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 SLITRK1Q96PX8 696 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 TRAIPQ9BWF2 469 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 INO80BQ9C086 356 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 FHDC1Q9C0D6 1143 aaPredicted RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 INTS9Q9NV88 658 aaKnown RBP17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 NINJ2Q9NZG7 142 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 DNPEPQ9ULA0 475 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 TTC4O95801 387 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 ETS1P14921 441 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 TMEM132AQ24JP5 1023 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 DCUN1D2Q6PH85 259 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 XYLT2Q9H1B5 865 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 PDGFCQ9NRA1 345 aa17.51■□□□□ 0.39
UBQLN1-201ENST00000257468 IGKV6-21A0A0C4DH24 114 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 KRT19P08727 400 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 IQCF3P0C7M6 154 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CXCL8P10145 99 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CETPP11597 493 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 SLC20A2Q08357 652 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 MXD4Q14582 209 aaPredicted RBP17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 LRRC14Q15048 493 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 SGSM1Q2NKQ1 1148 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 P3H1Q32P28 736 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 ATF7IP2Q5U623 682 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 MFSD5Q6N075 450 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 DENND1BQ6P3S1 775 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 TCP11Q8WWU5 503 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CABS1Q96KC9 395 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 ANK1P16157 1881 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 GOLGA8SH3BPF8 625 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 LGR5O75473 907 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CALB1P05937 261 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 KLRC2P26717 231 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 AP3M2P53677 418 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CDH8P55286 799 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 IGBP1P78318 339 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 GRM1Q13255 1194 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 GJC2Q5T442 439 aaPredicted RBP17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 MPZL3Q6UWV2 235 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 YTHDF3Q7Z739 585 aaKnown RBP17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 SULF1Q8IWU6 871 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 DHX37Q8IY37 1157 aaKnown RBP17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 LRRC34Q8IZ02 419 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 CACNA2D3Q8IZS8 1091 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 TMEM35BQ8NCS4 154 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 C3orf20Q8ND61 904 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 OSBPL7Q9BZF2 842 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 RBPJLQ9UBG7 517 aa17.5■□□□□ 0.39
UBQLN1-201ENST00000257468 LIASO43766 372 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 PROZP22891 400 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 CNGA2Q16280 664 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 GKAP1Q5VSY0 366 aaPredicted RBP17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 ARHGEF2Q92974 986 aaKnown RBP17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 DCPSQ96C86 337 aaKnown RBP17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 PTPRHQ9HD43 1115 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 MLXIPLQ9NP71 852 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 HOMER3Q9NSC5 361 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 TBK1Q9UHD2 729 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 CYTH4Q9UIA0 394 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 GGA2Q9UJY4 613 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 CD19P15391 556 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 PPP1R15BQ5SWA1 713 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 EFCAB12Q6NXP0 572 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 SPOCD1Q6ZMY3 1216 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 TSHZ1Q6ZSZ6 1077 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 ERICH1Q86X53 443 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 CYP4X1Q8N118 509 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 CCDC89Q8N998 374 aa17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 ROPN1BQ9BZX4 212 aaPredicted RBP17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 ROPN1Q9HAT0 212 aaPredicted RBP17.49■□□□□ 0.39
UBQLN1-201ENST00000257468 EVPLQ92817 2033 aa17.48■□□□□ 0.39
UBQLN1-201ENST00000257468 ATP2C2O75185 946 aa17.48■□□□□ 0.39
UBQLN1-201ENST00000257468 LSM8O95777 96 aaKnown RBP17.48■□□□□ 0.39
UBQLN1-201ENST00000257468 NFICP08651 508 aa17.48■□□□□ 0.39
UBQLN1-201ENST00000257468 ADCY1Q08828 1119 aa17.48■□□□□ 0.39
UBQLN1-201ENST00000257468 SMTNL2Q2TAL5 461 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms