RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ARID3BQ8IVW6 561 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PHC2Q8IXK0 858 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 LRRC34Q8IZ02 419 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 LILRB1Q8NHL6 650 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TGFBRAP1Q8WUH2 860 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 WNK4Q96J92 1243 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP4F11Q9HBI6 524 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CCNL1Q9UK58 526 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 USP21Q9UK80 565 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GJA3Q9Y6H8 435 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PLCG2P16885 1265 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PSMC3P17980 439 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 MCM7P33993 719 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 ARMC4Q5T2S8 1044 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TBC1D9BQ66K14 1250 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 ANO7Q6IWH7 933 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 GSTA5Q7RTV2 222 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SGK3Q96BR1 496 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SNRKQ9NRH2 765 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 UBA2Q9UBT2 640 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 RBM8AQ9Y5S9 174 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM172BPA6NC97 362 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 MINDY4BA8MYZ0 360 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TCF3P15923 654 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 XPAP23025 273 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CRABP2P29373 138 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TMPRSS15P98073 1019 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 KRT17Q04695 432 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SSRP1Q08945 709 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TTC27Q6P3X3 843 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TEX47Q8TBZ9 253 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PPP4R1Q8TF05 950 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 S100ZQ8WXG8 99 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 SMG7Q92540 1137 aaKnown RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 MTMR8Q96EF0 704 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 HSPBAP1Q96EW2 488 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 ASIC4Q96FT7 647 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 PLEKHA8Q96JA3 519 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CCSER1Q9C0I3 900 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 CRNNQ9UBG3 495 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 TRIM33Q9UPN9 1127 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 MTMR6Q9Y217 621 aa7.05□□□□□ -1.28
PDGFRA-201ENST00000257290 A0A1W2PRQ8 180 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PCNAP12004 261 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PTPN4P29074 926 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ARHGAP4P98171 946 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ECT2LQ008S8 904 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 HEXDCQ8WVB3 486 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 YME1L1Q96TA2 773 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 MKNK2Q9HBH9 465 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 TCF7L2Q9NQB0 619 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ASIC3Q9UHC3 531 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ITSN1Q15811 1721 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KCNQ3O43525 872 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 TLR2O60603 784 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 TIPRLO75663 272 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CAPZA2P47755 286 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 RAD51Q06609 339 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 LGSNQ5TDP6 509 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM117BQ6P1L5 589 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SPATA5Q8NB90 893 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PLEKHO2Q8TD55 490 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KRT84Q9NSB2 600 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 MALT1Q9UDY8 824 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 POLG2Q9UHN1 485 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 RWDD2AQ9UIY3 292 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SH3BGRL2Q9UJC5 107 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SH3TC1Q8TE82 1336 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SLIT1O75093 1534 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 A0A0G2JND7 137 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KCNK3O14649 394 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 AKAP10O43572 662 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ICMTO60725 284 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 UPP2O95045 317 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PPP3CCP48454 512 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 OTUD4Q01804 1114 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 RELAQ04206 551 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 LSAMPQ13449 338 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PGM2L1Q6PCE3 622 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CCNJLQ8IV13 435 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SRRM1Q8IYB3 904 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CCDC124Q96CT7 223 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 MND1Q9BWT6 205 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CALN1Q9BXU9 219 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 WDR12Q9GZL7 423 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 AZI2Q9H6S1 392 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 NMRK1Q9NWW6 199 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 AIPL1Q9NZN9 384 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 RCOR1Q9UKL0 485 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ADGRG1Q9Y653 693 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PRSS44E7EML9 344 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 TRAPPC3O43617 180 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ITGA6P23229 1130 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 EPHB1P54762 984 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CAPRIN1Q14444 709 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PLA2G4EQ3MJ16 856 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 LAYNQ6UX15 382 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 DNAJC10Q8IXB1 793 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms