RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ZNFX1Q9P2E3 1918 aaKnown RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ZSCAN5CA6NGD5 496 aaPredicted RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 CENPBD1B2RD01 187 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 TCP11X1B4DZS4 312 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 H0Y3Z8 333 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 PEX10O60683 326 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ADAM23O75077 832 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 TRMUO75648 421 aaKnown RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 FARP2O94887 1054 aaPredicted RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 MOCS3O95396 460 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 COL6A2P12110 1019 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ENPP1P22413 925 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 GNA11P29992 359 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 FOSBP53539 338 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 KCNC4Q03721 635 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 MYLK3Q32MK0 819 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 KHDC1Q4VXA5 237 aaKnown RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 CYP2U1Q7Z449 544 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ECHDC2Q86YB7 292 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 MCF2L2Q86YR7 1114 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 GOLM1Q8NBJ4 401 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 OR7G1Q8NGA0 311 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF398Q8TD17 642 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 GTF3C2Q8WUA4 911 aaPredicted RBP12.46□□□□□ -0.42
CCNA1-201ENST00000255465 SCFD1Q8WVM8 642 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 DPF3Q92784 378 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 MAGEB18Q96M61 343 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 LRRC37BQ96QE4 947 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 FBXO28Q9NVF7 368 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 EHD2Q9NZN4 543 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 IKBKGQ9Y6K9 419 aa12.46□□□□□ -0.42
CCNA1-201ENST00000255465 TNKSO95271 1327 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 FAM25EA8MYX2 175 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 KIF28PB7ZC32 967 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 DDX3XO00571 662 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCNA1-201ENST00000255465 PFDN6O15212 129 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 CCDC22O60826 627 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 OPHN1O60890 802 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 ENTPD5O75356 428 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 CTGFP29279 349 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 DSG3P32926 999 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 VPS41P49754 854 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 MCCD1P59942 119 aaPredicted RBP12.45□□□□□ -0.42
CCNA1-201ENST00000255465 MED21Q13503 144 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 LRP8Q14114 963 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 WDR45BQ5MNZ6 344 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 SIGIRRQ6IA17 410 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 PALB2Q86YC2 1186 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 VPS37AQ8NEZ2 397 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 GIPC3Q8TF64 312 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 ANKS1AQ92625 1134 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 GMCL1Q96IK5 515 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 MRPS26Q9BYN8 205 aaKnown RBP12.45□□□□□ -0.42
CCNA1-201ENST00000255465 VPS16Q9H269 839 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 TMEM60Q9H2L4 133 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 GPAMQ9HCL2 828 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 CLIC5Q9NZA1 410 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 RABGAP1Q9Y3P9 1069 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 MYH10P35580 1976 aa12.45□□□□□ -0.42
CCNA1-201ENST00000255465 MYH6P13533 1939 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 LOC105371267A0A1B0GV96 52 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CPLX1O14810 134 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 MAGEB3O15480 346 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TBX10O75333 385 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CNMDO75829 334 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 BMP3P12645 472 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CDC25AP30304 524 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 SLC1A4P43007 532 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 NUP107P57740 925 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 BASP1P80723 227 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 WASHC5Q12768 1159 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 PAK1Q13153 545 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 Q3C1V9 767 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TWF2Q6IBS0 349 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 KLHDC10Q6PID8 442 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 OTOP1Q7RTM1 612 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 ZNF598Q86UK7 904 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CEP70Q8NHQ1 597 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 HSPBAP1Q96EW2 488 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 FNBP1Q96RU3 617 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 OLFM1Q99784 485 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 NEURL2Q9BR09 285 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 SEZ6LQ9BYH1 1024 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 MYLK2Q9H1R3 596 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 MTMR7Q9Y216 660 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 UTP11Q9Y3A2 253 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 SMCHD1A6NHR9 2005 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 PLXNB2O15031 1838 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 MAGEB2O15479 319 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 POLR2DO15514 142 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms