RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 SCLT1Q96NL6 688 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 CELF4Q9BZC1 486 aaKnown RBP12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 ADAMTS10Q9H324 1103 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 IFT122Q9HBG6 1241 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 CALCOCO1Q9P1Z2 691 aa12.14□□□□□ -0.47
CLUHP3-201ENST00000254109 GOLGA6L10A6NI86 522 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 PRKCBP05771 671 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 IQCF3P0C7M6 154 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 ACO1P21399 889 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 FGFR4P22455 802 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 ECHS1P30084 290 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 GNA15P30679 374 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 MARCKSL1P49006 195 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 CDK7P50613 346 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 LRIG3Q6UXM1 1119 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 CPA5Q8WXQ8 436 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 ACO2Q99798 780 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 TMEM106CQ9BVX2 250 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 CCDC113Q9H0I3 377 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 DPH5Q9H2P9 285 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 APOBEC3GQ9HC16 384 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 CWC15Q9P013 229 aaKnown RBP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 ANAPC7Q9UJX3 599 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 NOD1Q9Y239 953 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 NR2E1Q9Y466 385 aa12.13□□□□□ -0.47
CLUHP3-201ENST00000254109 INO80B-WBP1J3KQ70 363 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 MYO1FO00160 1098 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 PODXLO00592 558 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 OGTO15294 1046 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 CALCAP01258 141 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 CYP1A1P04798 512 aaPredicted RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 IVLP07476 585 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 PYGMP11217 842 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 GBP1P32455 592 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 SLC1A1P43005 524 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 CENPCQ03188 943 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 ZSCAN26Q16670 478 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 TMEM132AQ24JP5 1023 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 TAF2Q6P1X5 1199 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 SLC13A5Q86YT5 568 aaPredicted RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 EFCAB13Q8IY85 973 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 OR5B17Q8NGF7 314 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 TMEM40Q8WWA1 233 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 PIK3R5Q8WYR1 880 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 OSMRQ99650 979 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 INO80BQ9C086 356 aaPredicted RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 MRPL47Q9HD33 250 aaKnown RBP12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 ERVK-5Q9HDB9 667 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 PLAAQ9Y263 795 aa12.12□□□□□ -0.47
CLUHP3-201ENST00000254109 A6NNZ2 444 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 B4GALT5O43286 388 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 KRT14P02533 472 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 CTSHP09668 335 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 RRM1P23921 792 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 HSD17B3P37058 310 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MBTD1Q05BQ5 628 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MCL1Q07820 350 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TRPC3Q13507 836 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 DUOXA2Q1HG44 320 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TUBB8Q3ZCM7 444 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 AADACL2Q6P093 401 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 C1orf131Q8NDD1 294 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 UBLCP1Q8WVY7 318 aaPredicted RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 CYFIP2Q96F07 1278 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PAWRQ96IZ0 340 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TRIM51Q9BSJ1 452 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PCYOX1Q9UHG3 505 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 CNTN6Q9UQ52 1028 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 NUB1Q9Y5A7 615 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 CDY2AQ9Y6F7 541 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 MKI67P46013 3256 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 THAP12O43422 761 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 RPS6KA5O75582 802 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 CHRNA1P02708 482 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 COL6A1P12109 1028 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 EN2P19622 333 aaPredicted RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 THPOP40225 353 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TNFSF9P41273 254 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PHKA2P46019 1235 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 PTK7Q13308 1070 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 SGSM1Q2NKQ1 1148 aa12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
CLUHP3-201ENST00000254109 TTMPQ5BVD1 217 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms