RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 TNFRSF21O75509 655 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 PDE9AO76083 593 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 MYO1DO94832 1006 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ZNF23P17027 643 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ITPRIPL1Q6GPH6 555 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 TTC27Q6P3X3 843 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 HEXIM2Q96MH2 286 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 KLF6Q99612 283 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 CARD8Q9Y2G2 431 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 USP17L3A6NCW0 530 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 USP17L4A6NCW7 530 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 LIN7AO14910 233 aaPredicted RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 FKBP9O95302 570 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 RARGP13631 454 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 SLC16A2P36021 539 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ANO4Q32M45 955 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 PAPD7Q5XG87 772 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 KCTD1Q719H9 257 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 FKBP9P1Q75LS8 142 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 USP17L1Q7RTZ2 530 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 RNF135Q8IUD6 432 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 SLC35G2Q8TBE7 412 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 REXO4Q9GZR2 422 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 INTS2Q9H0H0 1204 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 DMGDHQ9UI17 866 aaKnown RBP13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 SUGT1Q9Y2Z0 365 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 CSADQ9Y600 493 aa13.74□□□□□ -0.21
PCDHGA3-201ENST00000253812 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 CLDN3O15551 220 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 DGKIO75912 1065 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 DDR1Q08345 913 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 COASYQ13057 564 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 ITGADQ13349 1161 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 USP17L2Q6R6M4 530 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 AGAP11Q8TF27 550 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 ATP8B4Q8TF62 1192 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 LENG1Q96BZ8 264 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 ANKZF1Q9H8Y5 726 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 IARS2Q9NSE4 1012 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 MROH7Q68CQ1 1323 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 XPAP23025 273 aaPredicted RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 TAP1Q03518 808 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 BFSP2Q13515 415 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 COG2Q14746 738 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 SPANXN2Q5MJ10 180 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 SLFN12LQ6IEE8 588 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 MARK2Q7KZI7 788 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 ARMCX2Q7L311 632 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 A0A1W2PQJ5 194 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 GOLGA8TH3BQL2 631 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 TBC1D12O60347 775 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 MYL2P10916 166 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 IMPDH2P12268 514 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 GEMIN4P57678 1058 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 FCHO2Q0JRZ9 810 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 SCARF1Q14162 830 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 RASA2Q15283 850 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 GSTA3Q16772 222 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 DGUOKQ16854 277 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 SZRD1Q7Z422 152 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 RCOR2Q8IZ40 523 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 RTL3Q8N8U3 475 aaKnown RBP13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 RIN3Q8TB24 985 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 CEP170P1Q96L14 293 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 PAGR1Q9BTK6 254 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 KIAA1586Q9HCI6 787 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 CASS4Q9NQ75 786 aa13.73□□□□□ -0.21
PCDHGA3-201ENST00000253812 GOLGA8JA6NMD2 632 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 IDH3BO43837 385 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 LDHAP00338 332 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 ITGA8P53708 1063 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 EIF3EP60228 445 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 TRIP4Q15650 581 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 FRMD5Q7Z6J6 570 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 RBBP8Q99708 897 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 BTBD10Q9BSF8 475 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CACNA2D2Q9NY47 1150 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 SRRM3A6NNA2 597 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 FCGR1AP12314 374 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CCDC130P13994 396 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CDH3P22223 829 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 SDC4P31431 198 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 ORC2Q13416 577 aaPredicted RBP13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 PTK2BQ14289 1009 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CNPY3Q9BT09 278 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 CYP39A1Q9NYL5 469 aa13.72□□□□□ -0.21
PCDHGA3-201ENST00000253812 TYW5A2RUC4 315 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms