RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 DCLK3Q9C098 648 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CDC42EP4Q9H3Q1 356 aaKnown RBP16.15■□□□□ 0.18
CAPN7-201ENST00000253693 ERVK-5Q9HDB9 667 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 MAD1L1Q9Y6D9 718 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CAPN9O14815 690 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CDH6P55285 790 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CCDC14Q49A88 953 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 PPP6R3Q5H9R7 873 aaPredicted RBP16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 NCAPGQ9BPX3 1015 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
CAPN7-201ENST00000253693 ZNF541Q9H0D2 1346 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 MAFO75444 373 aaPredicted RBP16.15■□□□□ 0.18
CAPN7-201ENST00000253693 RAPGEF5Q92565 580 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 RNF34Q969K3 372 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 SERPINB12Q96P63 405 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 AP5M1Q9H0R1 490 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 TMEM59LQ9UK28 342 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 ACKR2O00590 384 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 IRF6O14896 467 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 CHRNB2P17787 502 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 MAGEA4P43358 317 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 FAM133BQ5BKY9 247 aaKnown RBP16.15■□□□□ 0.18
CAPN7-201ENST00000253693 ZNF484Q5JVG2 852 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 OR5B17Q8NGF7 314 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 SEC16BQ96JE7 1060 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 MAF1Q9H063 256 aa16.15■□□□□ 0.18
CAPN7-201ENST00000253693 KCNA3P22001 575 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 MCL1Q07820 350 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 HIF1AQ16665 826 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 SMTNL2Q2TAL5 461 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 BSPRYQ5W0U4 402 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 LBX2Q6XYB7 198 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 GTF3C2Q8WUA4 911 aaPredicted RBP16.14■□□□□ 0.17
CAPN7-201ENST00000253693 ACSF2Q96CM8 615 aaPredicted RBP16.14■□□□□ 0.17
CAPN7-201ENST00000253693 HPDLQ96IR7 371 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 TSNARE1Q96NA8 513 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 SYNJ2BP-COX16A0A087WUM0 186 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 CST8O60676 142 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 MT-ND3P03897 115 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 PDGFRAP16234 1089 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 SPARCL1Q14515 664 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 TREML2Q5T2D2 321 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 B3GNT9Q6UX72 402 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 TRAPPC12Q8WVT3 735 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 SREK1Q8WXA9 508 aaKnown RBP16.14■□□□□ 0.17
CAPN7-201ENST00000253693 PITPNM3Q9BZ71 974 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
CAPN7-201ENST00000253693 COX16Q9P0S2 106 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 NUB1Q9Y5A7 615 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 HEY1Q9Y5J3 304 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 A0A0B4J269 797 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 RIPK2O43353 540 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 FLT3P36888 993 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 C3orf20Q8ND61 904 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 FAF2Q96CS3 445 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 NR2E1Q9Y466 385 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 AFG3L2Q9Y4W6 797 aa16.14■□□□□ 0.17
CAPN7-201ENST00000253693 I3L4J1 428 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
CAPN7-201ENST00000253693 ARL4AP40617 200 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 EIF3EP60228 445 aaKnown RBP16.13■□□□□ 0.17
CAPN7-201ENST00000253693 ATP11AP98196 1134 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 LRRC19Q9H756 370 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 MAFBQ9Y5Q3 323 aaPredicted RBP16.13■□□□□ 0.17
CAPN7-201ENST00000253693 CXCL8P10145 99 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 ICAM3P32942 547 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 TFDP3Q5H9I0 405 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 ATP11CQ8NB49 1132 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 PLEKHO2Q8TD55 490 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 SNX9Q9Y5X1 595 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 TMEM120BA0PK00 339 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 STAG3L1P0CL83 205 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 MAP3K10Q02779 954 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 MAMLD1Q13495 774 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 STILQ15468 1287 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 REPS2Q8NFH8 660 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 LMO3Q8TAP4 145 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 NT5C1AQ9BXI3 368 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 NEUROG2Q9H2A3 272 aa16.13■□□□□ 0.17
CAPN7-201ENST00000253693 PIK3R2O00459 728 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 FSCN2O14926 492 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 PEX10O60683 326 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 ROR1Q01973 937 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 OR6J1Q8NGC5 347 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 PGM2Q96G03 612 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 METTL5Q9NRN9 209 aaKnown RBP16.12■□□□□ 0.17
CAPN7-201ENST00000253693 BCAR1P56945 870 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 KLHL38Q2WGJ6 581 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 FAM47CQ5HY64 1035 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 NME8Q8N427 588 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 OPTNQ96CV9 577 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 TGS1Q96RS0 853 aaKnown RBP16.12■□□□□ 0.17
CAPN7-201ENST00000253693 A8MXQ7 604 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 MTA2O94776 668 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 GJB6O95452 261 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 TTC4O95801 387 aa16.12■□□□□ 0.17
CAPN7-201ENST00000253693 C4BPAP04003 597 aaKnown RBP16.12■□□□□ 0.17
CAPN7-201ENST00000253693 COPS2P61201 443 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms