RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NR2F2P24468 414 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 RPL13P26373 211 aaKnown RBP13.73□□□□□ -0.21
VPREB3-201ENST00000248948 PPP1R2P41236 205 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 UBE2HP62256 183 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 PABPC1LQ4VXU2 614 aaKnown RBP13.73□□□□□ -0.21
VPREB3-201ENST00000248948 WSCD1Q658N2 575 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 GET4Q7L5D6 327 aaPredicted RBP13.73□□□□□ -0.21
VPREB3-201ENST00000248948 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
VPREB3-201ENST00000248948 PDCL2Q8N4E4 241 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 LEMD2Q8NC56 503 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 HPDLQ96IR7 371 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 FAM84AQ96KN4 292 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 RTP3Q9BQQ7 232 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 EPHX3Q9H6B9 360 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 POLIQ9UNA4 740 aa13.73□□□□□ -0.21
VPREB3-201ENST00000248948 PATJQ8NI35 1801 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 LRRIQ3A6PVS8 624 aaPredicted RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 TULP1O00294 542 aaPredicted RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 GPR37L1O60883 481 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 N4BP1O75113 896 aaKnown RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 VNN2O95498 520 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 OR4Q2P0C623 313 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 ATICP31939 592 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 GBP2P32456 591 aaPredicted RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 MYL7Q01449 175 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 TSPY1Q01534 308 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 CEP135Q66GS9 1140 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 CENPPQ6IPU0 288 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 INTS8Q75QN2 995 aaKnown RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 LIMS2Q7Z4I7 341 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 UBALD2Q8IYN6 164 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 ELMOD1Q8N336 334 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 SPPL2BQ8TCT7 592 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 TMC2Q8TDI7 906 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 PARD3BQ8TEW8 1205 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 EDAQ92838 391 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 NXPE3Q969Y0 559 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 SYAP1Q96A49 352 aaPredicted RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 VRTNQ9H8Y1 702 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 IGSF9Q9P2J2 1179 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 MAPK8IP1Q9UQF2 711 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
VPREB3-201ENST00000248948 KIF26AQ9ULI4 1882 aaPredicted RBP13.72□□□□□ -0.21
VPREB3-201ENST00000248948 PRR33A8MZF0 331 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 GABRDO14764 452 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 IKBKBO14920 756 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 GADD45BO75293 160 aaPredicted RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 MICAL2O94851 1124 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 PCSK1P29120 753 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 LHX1P48742 406 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 CASP4P49662 377 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 EPHA5P54756 1037 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 ZXDAP98168 799 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 LRRC63Q05C16 580 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 TWF1Q12792 350 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 SLC39A12Q504Y0 691 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 TMEM31Q5JXX7 168 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 IQCEQ6IPM2 695 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 DCP1BQ8IZD4 617 aaKnown RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 PLEKHO2Q8TD55 490 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 PGLYRP2Q96PD5 576 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 MYADMQ96S97 322 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 TMEM209Q96SK2 561 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 ACBD6Q9BR61 282 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 C11orf16Q9NQ32 467 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 HCFC1R1Q9NWW0 138 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 DDX43Q9NXZ2 648 aaKnown RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 DNMT3BQ9UBC3 853 aaKnown RBP13.71□□□□□ -0.21
VPREB3-201ENST00000248948 CDH7Q9ULB5 785 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 ZNF318Q5VUA4 2279 aa13.71□□□□□ -0.21
VPREB3-201ENST00000248948 AKAP3O75969 853 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 RHOP08100 348 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 LAMP2P13473 410 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 PTPN2P17706 415 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 TNNC1P63316 161 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 NTHL1P78549 312 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 SIGLEC14Q08ET2 396 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 DUSP4Q13115 394 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 BIRC3Q13489 604 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 TRPC3Q13507 836 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 STIM1Q13586 685 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 SOWAHAQ2M3V2 549 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ZACNQ401N2 412 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 INTS6LQ5JSJ4 861 aaKnown RBP13.7□□□□□ -0.22
VPREB3-201ENST00000248948 CLEC17AQ6ZS10 378 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 MTSS1LQ765P7 747 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 NPAS3Q8IXF0 933 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
VPREB3-201ENST00000248948 FAM186BQ8IYM0 893 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 ZNF516Q92618 1163 aa13.7□□□□□ -0.22
VPREB3-201ENST00000248948 FGF13Q92913 245 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms