RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 SHROOM1Q2M3G4 852 aaPredicted RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 C1orf220Q5T0J3 134 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 STXBP4Q6ZWJ1 553 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 ANKS1BQ7Z6G8 1248 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 NME8Q8N427 588 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 BBOF1Q8ND07 529 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 MIPOL1Q8TD10 442 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 PLEKHO2Q8TD55 490 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 IWS1Q96ST2 819 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 SLC17A7Q9P2U7 560 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 GAKO14976 1311 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 TNRC6CQ9HCJ0 1690 aaKnown RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 MYH11P35749 1972 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 H3BRJ5 948 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 RALAP11233 206 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 DESP17661 470 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 SEPT7Q16181 437 aaKnown RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 OLFML2BQ68BL8 750 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 RAPH1Q70E73 1250 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 TCP10LQ8TDR4 215 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 AGBL1Q96MI9 1066 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 KLF6Q99612 283 aaPredicted RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 PHACTR1Q9C0D0 580 aa13.14□□□□□ -0.31
NR1D1-201ENST00000246672 WRAP73Q9P2S5 460 aaPredicted RBP13.14□□□□□ -0.31
NR1D1-201ENST00000246672 FCHO1O14526 889 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 UFL1O94874 794 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 BMP3P12645 472 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 CYP11B1P15538 503 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ADSSP30520 456 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 MAP3K10Q02779 954 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 LLGL2Q6P1M3 1020 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ACAD11Q709F0 780 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ARHGAP24Q8N264 748 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 SLC25A41Q8N5S1 370 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 CBWD1Q9BRT8 395 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 TSSK1BQ9BXA7 367 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 NMUR2Q9GZQ4 415 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 MTO1Q9Y2Z2 717 aaKnown RBP13.13□□□□□ -0.31
NR1D1-201ENST00000246672 GMEB1Q9Y692 573 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 UBE4BO95155 1302 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 PIK3CDO00329 1044 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 BUD23O43709 281 aaKnown RBP13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ZNF862O60290 1169 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ADRA2BP18089 450 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 ARL4CP56559 192 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 AP2B1P63010 937 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 GRAPQ13588 217 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
NR1D1-201ENST00000246672 GSTA5Q7RTV2 222 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 SLC9A9Q8IVB4 645 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 RBM15BQ8NDT2 890 aaKnown RBP13.13□□□□□ -0.31
NR1D1-201ENST00000246672 CCDC110Q8TBZ0 833 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
NR1D1-201ENST00000246672 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 SEL1LQ9UBV2 794 aa13.13□□□□□ -0.31
NR1D1-201ENST00000246672 F5H6K3 240 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 DLDP09622 509 aaKnown RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ZSCAN5DPP0CG00 497 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 KLRC2P26717 231 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ACTR3P61158 418 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 RASA2Q15283 850 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ALYREFQ86V81 257 aaKnown RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 RASSF3Q86WH2 238 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SCUBE1Q8IWY4 988 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 VTI1AQ96AJ9 217 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 OXNAD1Q96HP4 312 aaPredicted RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 THTPAQ9BU02 230 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 K7ENM7 598 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 TMCC1O94876 653 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 MYL2P10916 166 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 CIITAP33076 1130 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SH3BGRP55822 239 aaPredicted RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 CENPCQ03188 943 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 MDH1BQ5I0G3 518 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SLFN13Q68D06 897 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ACAD10Q6JQN1 1059 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 NET1Q7Z628 596 aaPredicted RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 TREML1Q86YW5 311 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ZBED8Q8IZ13 594 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 DHX38Q92620 1227 aaKnown RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 AMNQ9BXJ7 453 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 TUFT1Q9NNX1 390 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 PSMC3IPQ9P2W1 217 aaPredicted RBP13.12□□□□□ -0.31
NR1D1-201ENST00000246672 NARFQ9UHQ1 456 aa13.12□□□□□ -0.31
NR1D1-201ENST00000246672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
NR1D1-201ENST00000246672 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms