RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 CCDC89Q8N998 374 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 TRPM4Q8TD43 1214 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 CISHQ9NSE2 258 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 PARVAQ9NVD7 372 aa17.81■□□□□ 0.44
SSPN-201ENST00000242729 MAP3K20Q9NYL2 800 aaKnown RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 COL11A1P12107 1806 aaPredicted RBP17.81■□□□□ 0.44
SSPN-201ENST00000242729 RPSAP08865 295 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 CD48P09326 243 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 KRT15P19012 456 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 TAF5Q15542 800 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 PKN2Q16513 984 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 CCNG2Q16589 344 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 DALRD3Q5D0E6 543 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 NCAPG2Q86XI2 1143 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 RNF149Q8NC42 400 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 NLRP4Q96MN2 994 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 SLITRK1Q96PX8 696 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 TMEM109Q9BVC6 243 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 ROPN1BQ9BZX4 212 aaPredicted RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 ROPN1Q9HAT0 212 aaPredicted RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 ALG13Q9NP73 1137 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 LIASO43766 372 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 MAP3K6O95382 1288 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 MYBL1P10243 752 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 GDF10P55107 478 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 TGFB2P61812 414 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 PLEKHA7Q6IQ23 1121 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 CGB2Q6NT52 195 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 CGRRF1Q99675 332 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 NSRP1Q9H0G5 558 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 DHX33Q9H6R0 707 aaKnown RBP17.8■□□□□ 0.44
SSPN-201ENST00000242729 ECT2Q9H8V3 914 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 BRCA2P51587 3418 aa17.8■□□□□ 0.44
SSPN-201ENST00000242729 A0A1W2PPM1 405 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 ZC3H11AO75152 810 aaKnown RBP eCLIP17.79■□□□□ 0.44
SSPN-201ENST00000242729 KLRC2P26717 231 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 TCF7P36402 384 aaPredicted RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 LACTB2Q53H82 288 aaPredicted RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 WDR78Q5VTH9 848 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 KATNAL2Q8IYT4 538 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 WDTC1Q8N5D0 677 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 FITM2Q8N6M3 262 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 RDM1Q8NG50 284 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 SLCO2A1Q92959 643 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 NKIRAS1Q9NYS0 192 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 MMP8P22894 467 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 RFC1P35251 1148 aaPredicted RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 RHPN2Q8IUC4 686 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 JOSD2Q8TAC2 188 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 TRIM11Q96F44 468 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 FAM81BQ96LP2 452 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 AGTPBP1Q9UPW5 1226 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 PSTPIP1O43586 416 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 NAMPTP43490 491 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 WDR4P57081 412 aaKnown RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 IGBP1P78318 339 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 MGAT5Q09328 741 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 PDIA2Q13087 525 aaKnown RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 RAB6CQ53S08 254 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 DENND1BQ6P3S1 775 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 SPATA21Q7Z572 469 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 ZNF677Q86XU0 584 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 EXD1Q8NHP7 514 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 RAB6CQ9H0N0 254 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 GGA3Q9NZ52 723 aa17.79■□□□□ 0.44
SSPN-201ENST00000242729 MAFBQ9Y5Q3 323 aaPredicted RBP17.79■□□□□ 0.44
SSPN-201ENST00000242729 WDR81Q562E7 1941 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 TMEM191CA6NGB0 347 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 IGF2BP3O00425 579 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSPN-201ENST00000242729 MAFGO15525 162 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 DKC1O60832 514 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSPN-201ENST00000242729 ECM2O94769 699 aaPredicted RBP17.78■□□□□ 0.44
SSPN-201ENST00000242729 TMEM191BP0C7N4 346 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 SSTR1P30872 391 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 ARL2P36404 184 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 STAT5BP51692 787 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 CLDN10P78369 228 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 TRPC3Q13507 836 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 PLCB4Q15147 1175 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 WDR72Q3MJ13 1102 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 ANKRD22Q5VYY1 191 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 SPOCD1Q6ZMY3 1216 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 CATSPERGQ6ZRH7 1159 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 KIAA1586Q9HCI6 787 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 CHUKO15111 745 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 GCAP28676 217 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 XRCC4Q13426 336 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 ACCSLQ4AC99 568 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 MAIP1Q8WWC4 291 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 CKAP2Q8WWK9 683 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 AS3MTQ9HBK9 375 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 HMGXB4Q9UGU5 601 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 IP6K2Q9UHH9 426 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 CYTH4Q9UIA0 394 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 GRID1Q9ULK0 1009 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 SLC12A4Q9UP95 1085 aa17.78■□□□□ 0.44
SSPN-201ENST00000242729 INO80B-WBP1J3KQ70 363 aa17.77■□□□□ 0.44
SSPN-201ENST00000242729 CDH16O75309 829 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms