RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DNAJB2P25686 324 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CYP51A1Q16850 503 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 TDRD10Q5VZ19 366 aaKnown RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 GLB1LQ6UWU2 654 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 MOV10L1Q9BXT6 1211 aaKnown RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 A0A0G2JLW4 131 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 DYNC1LI2O43237 492 aaPredicted RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 CLCN6P51797 869 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 ARF5P84085 180 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CSTF3Q12996 717 aaKnown RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 GNASQ5JWF2 1037 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 TRIM72Q6ZMU5 477 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 DPP10Q8N608 796 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 SSH3Q8TE77 659 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 MYBL1P10243 752 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 THPOP40225 353 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 MCAMP43121 646 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 NME5P56597 212 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CACUL1Q86Y37 369 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PROM2Q8N271 834 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CNDP1Q96KN2 507 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 ZNF304Q9HCX3 659 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 SH3GLB2Q9NR46 395 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 ATP10BO94823 1461 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PRKCBP05771 671 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 SCP2P22307 547 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 DDI2Q5TDH0 399 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PCYOX1LQ8NBM8 494 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CATSPER1Q8NEC5 780 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 VPS37AQ8NEZ2 397 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 SLITRK1Q96PX8 696 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
NEK9-201ENST00000238616 SCN3BQ9NY72 215 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 SAMD9Q5K651 1589 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 GRK3P35626 688 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 PALLDQ8WX93 1383 aa13.78□□□□□ -0.2
NEK9-201ENST00000238616 DLGAP3O95886 979 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 MIIPQ5JXC2 388 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 RESP18Q5W5W9 173 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 KLK14Q9P0G3 267 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 CFAP99D6REC4 459 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 HNRNPRO43390 633 aaKnown RBP13.77□□□□□ -0.2
NEK9-201ENST00000238616 KIF23Q02241 960 aaPredicted RBP13.77□□□□□ -0.2
NEK9-201ENST00000238616 KYAT1Q16773 422 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 AKIRIN2Q53H80 203 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 SUSD4Q5VX71 490 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 PMPCBO75439 489 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 ABCB1P08183 1280 aaPredicted RBP13.77□□□□□ -0.2
NEK9-201ENST00000238616 ATP1A3P13637 1013 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 STAT5BP51692 787 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 AAASQ9NRG9 546 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 NDOR1Q9UHB4 597 aa13.77□□□□□ -0.2
NEK9-201ENST00000238616 CCDC188H7C350 402 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 AKAP5P24588 427 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 TXNRD1Q16881 649 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 PRPF39Q86UA1 669 aaKnown RBP13.77□□□□□ -0.21
NEK9-201ENST00000238616 UBA3Q8TBC4 463 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 DDX47Q9H0S4 455 aaKnown RBP13.77□□□□□ -0.21
NEK9-201ENST00000238616 KCTD10Q9H3F6 313 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 CYP27B1O15528 508 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 ADI1Q9BV57 179 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 IGFLR1Q9H665 355 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 SESN1Q9Y6P5 492 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 NEDD4P46934 1319 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.211e-6■□□□□ 9.7
NEK9-201ENST00000238616 TNNI3P19429 210 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 LPIN1Q14693 890 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 HLFQ16534 295 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 RABGAP1LQ5R372 815 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 VSTM4Q8IW00 320 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
NEK9-201ENST00000238616 FBXO10Q9UK96 956 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 GNG14A0A1W2PPG7 69 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 A0A1W2PQ27 194 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 A0A1W2PQ64 194 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 A0A1W2PQD8 194 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 RHOBTB1O94844 696 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 PRDX5P30044 214 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 DSG3P32926 999 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 SOX6P35712 828 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 RGS2P41220 211 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 DYNC1I2Q13409 638 aaKnown RBP13.77□□□□□ -0.21
NEK9-201ENST00000238616 TRIM25Q14258 630 aaKnown RBP13.77□□□□□ -0.21
NEK9-201ENST00000238616 TMEM132BQ14DG7 1078 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 COQ6Q9Y2Z9 468 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 TBX22Q9Y458 520 aa13.77□□□□□ -0.21
NEK9-201ENST00000238616 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
NEK9-201ENST00000238616 POU1F1P28069 291 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms