RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 THEM5Q8N1Q8 247 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 GDPD5Q8WTR4 605 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 KBTBD7Q8WVZ9 684 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 KAT5Q92993 513 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 KREMEN1Q96MU8 473 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 ARID3AQ99856 593 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 TCF25Q9BQ70 676 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 HERC2P3Q9BVR0 1158 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 LSM14BQ9BX40 385 aaKnown RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 ZBP1Q9H171 429 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 SNX25Q9H3E2 840 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 PRDM12Q9H4Q4 367 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 SMYD3Q9H7B4 428 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 NGRNQ9NPE2 291 aaKnown RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 FAM207AQ9NSI2 230 aaPredicted RBP10.88□□□□□ -0.67
HMGCL-201ENST00000235958 APEX2Q9UBZ4 518 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 DNAJC12Q9UKB3 198 aa10.88□□□□□ -0.67
HMGCL-201ENST00000235958 FSD2A1L4K1 749 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 H7C4K7 107 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 FSCN2O14926 492 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 EPHB6O15197 1021 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 CSPG5O95196 566 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 URODP06132 367 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 TPM3P06753 285 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 UCHL3P15374 230 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 RPL17P18621 184 aaKnown RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 CD58P19256 250 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 WARSP23381 471 aaKnown RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 TBXAS1P24557 533 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 IRS1P35568 1242 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 PBX1P40424 430 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 MFAP3P55082 362 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 GCNT1Q02742 428 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 CTXN3Q4LDR2 81 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 PDE12Q6L8Q7 609 aaKnown RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 PDXDC1Q6P996 788 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 RSPO2Q6UXX9 243 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 NEK11Q8NG66 645 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 OR6B3Q8NGW1 331 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 SPATA18Q8TC71 538 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 PIK3R5Q8WYR1 880 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 MRPL38Q96DV4 380 aaKnown RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 CLSTN3Q9BQT9 956 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 LMAN2LQ9H0V9 348 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 RXFP1Q9HBX9 757 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 ENTPD7Q9NQZ7 604 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 CISHQ9NSE2 258 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 DDX43Q9NXZ2 648 aaKnown RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 BARX2Q9UMQ3 279 aaPredicted RBP10.87□□□□□ -0.67
HMGCL-201ENST00000235958 SSX2IPQ9Y2D8 614 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 STXBP5LQ9Y2K9 1186 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 NME7Q9Y5B8 376 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 PCDHGC5Q9Y5F6 944 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 BACE2Q9Y5Z0 518 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 IRAK3Q9Y616 596 aa10.87□□□□□ -0.67
HMGCL-201ENST00000235958 TRANK1O15050 2925 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 GOLGA6L3A6NEY3 463 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 C2orf71A6NGG8 1288 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 HIDE1A8MVS5 230 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 RNF225M0QZC1 329 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 FOXN3O00409 490 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ADAM12O43184 909 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 HCRTO43612 131 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ATP2C2O75185 946 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 CNPP09543 421 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ACO1P21399 889 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ACAT1P24752 427 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 OR1D2P34982 312 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 CA8P35219 290 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 NDST1P52848 882 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 POLR2FP61218 127 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 SMC1AQ14683 1233 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 PTPN14Q15678 1187 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 PSMD5Q16401 504 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 PLPP4Q5VZY2 271 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 IQCEQ6IPM2 695 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ENOSF1Q7L5Y1 443 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 LRRTM3Q86VH5 581 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 TTC39CQ8N584 583 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 WHAMMQ8TF30 809 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 JAKMIP2Q96AA8 810 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 ACBD6Q9BR61 282 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 NAA15Q9BXJ9 866 aaKnown RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 STK33Q9BYT3 514 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 GANQ9H2C0 597 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 NLRC4Q9NPP4 1024 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 FNIP2Q9P278 1114 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 MTRRQ9UBK8 725 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 FBXL5Q9UKA1 691 aa10.86□□□□□ -0.67
HMGCL-201ENST00000235958 AJAP1Q9UKB5 411 aaPredicted RBP10.86□□□□□ -0.67
HMGCL-201ENST00000235958 PCDHB4Q9Y5E5 795 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms