RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 BEX3Q00994 111 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 ZC2HC1CQ53FD0 456 aaPredicted RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 UBAP2Q5T6F2 1119 aaKnown RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 AADACL2Q6P093 401 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 METTL7BQ6UX53 244 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 BZW1Q7L1Q6 419 aaKnown RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 BBOF1Q8ND07 529 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 DYDC1Q8WWB3 177 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 RAB3IPQ96QF0 476 aaPredicted RBP21.78■■□□□ 1.08
SNX3-201ENST00000230085 AP5M1Q9H0R1 490 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 ST6GALNAC4Q9H4F1 302 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 TMEM206Q9H813 350 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 CTNNAL1Q9UBT7 734 aa21.78■■□□□ 1.08
SNX3-201ENST00000230085 ABLIM1O14639 778 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 CDH16O75309 829 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 UNC5CO95185 931 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 TRIM49P0CI25 452 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 TRIM49CP0CI26 452 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 GJA8P48165 433 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 IFNAR2P48551 515 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 CYP4A11Q02928 519 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 ENPEPQ07075 957 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 NR1H3Q13133 447 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 LAMC2Q13753 1193 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 APLFQ8IW19 511 aaPredicted RBP21.77■■□□□ 1.08
SNX3-201ENST00000230085 RPUSD2Q8IZ73 545 aaKnown RBP21.77■■□□□ 1.08
SNX3-201ENST00000230085 AFG1LQ8WV93 481 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 EMID1Q96A84 441 aaPredicted RBP21.77■■□□□ 1.08
SNX3-201ENST00000230085 TBC1D31Q96DN5 1066 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 SPATA33Q96N06 139 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 UBN1Q9NPG3 1134 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 TXLNGQ9NUQ3 528 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 RGL1Q9NZL6 768 aa21.77■■□□□ 1.08
SNX3-201ENST00000230085 NFASCO94856 1347 aa21.77■■□□□ 1.07
SNX3-201ENST00000230085 GRIK3Q13003 919 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 STRN3Q13033 797 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 LRCH2Q5VUJ6 765 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 NUGGCQ68CJ6 796 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 FITM2Q8N6M3 262 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 ZNF564Q8TBZ8 553 aaPredicted RBP21.76■■□□□ 1.07
SNX3-201ENST00000230085 SHC3Q92529 594 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 CRISPLD2Q9H0B8 497 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 UPF3AQ9H1J1 476 aaKnown RBP21.76■■□□□ 1.07
SNX3-201ENST00000230085 LRMDAQ9H2I8 198 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 SPC25Q9HBM1 224 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 JPH1Q9HDC5 661 aaPredicted RBP21.76■■□□□ 1.07
SNX3-201ENST00000230085 TBC1D22BQ9NU19 505 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 OGDHLQ9ULD0 1010 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 CORO1CQ9ULV4 474 aaPredicted RBP21.76■■□□□ 1.07
SNX3-201ENST00000230085 EXOC3O60645 756 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 KRT16P08779 473 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 CENPCQ03188 943 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 STAT4Q14765 748 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 ARHGAP44Q17R89 818 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 GNASQ5JWF2 1037 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 INPP5DQ92835 1189 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 FAM212AQ96EL1 285 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 FAM81BQ96LP2 452 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 ZNF570Q96NI8 536 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 PCDHB18PQ96TA0 734 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 RIT2Q99578 217 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 TRAIPQ9BWF2 469 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 UBE2TQ9NPD8 197 aaPredicted RBP21.76■■□□□ 1.07
SNX3-201ENST00000230085 KLHL14Q9P2G3 628 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 SLC9A2Q9UBY0 812 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 NEU2Q9Y3R4 380 aa21.76■■□□□ 1.07
SNX3-201ENST00000230085 SMIM23A6NLE4 172 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 GAS7O60861 476 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 SLCO1A2P46721 670 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 CYP2J2P51589 502 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 VAMP7P51809 220 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 ATP11AP98196 1134 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 MESDQ14696 234 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 NAA25Q14CX7 972 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 FSCN1Q16658 493 aaKnown RBP21.75■■□□□ 1.07
SNX3-201ENST00000230085 C1orf220Q5T0J3 134 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 KLHDC9Q8NEP7 349 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 PPTC7Q8NI37 304 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 AVENQ9NQS1 362 aaPredicted RBP21.75■■□□□ 1.07
SNX3-201ENST00000230085 ADAM22Q9P0K1 906 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 COQ4Q9Y3A0 265 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 STARD13Q9Y3M8 1113 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 EMSYQ7Z589 1322 aa21.75■■□□□ 1.07
SNX3-201ENST00000230085 TCRBV7S2A1N4TA0A589 114 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 A6NJR5 290 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 GAS8O95995 478 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 CCNE2O96020 404 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 YARSP54577 528 aaKnown RBP21.74■■□□□ 1.07
SNX3-201ENST00000230085 NKX3-2P78367 333 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 KRT17Q04695 432 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 BLMHQ13867 455 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 RASA2Q15283 850 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 LONRF1Q17RB8 773 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 ODR4Q5SWX8 454 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 RNF180Q86T96 592 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 TDRPQ86YL5 185 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 ARHGEF19Q8IW93 802 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 AGGF1Q8N302 714 aaeCLIP21.74■■□□□ 1.07
SNX3-201ENST00000230085 TEX9Q8N6V9 391 aa21.74■■□□□ 1.07
SNX3-201ENST00000230085 FBF1Q8TES7 1133 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms