RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 MRM1Q6IN84 353 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 KCNT2Q6UVM3 1135 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 C6orf15Q6UXA7 325 aaPredicted RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 WDR75Q8IWA0 830 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 UBR7Q8N806 425 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 ASAP3Q8TDY4 903 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 MRPS27Q92552 414 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 CASD1Q96PB1 797 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 APOL6Q9BWW8 343 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 LRRC3Q9BY71 257 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 CEP44Q9C0F1 390 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 GBP3Q9H0R5 595 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 CSRNP2Q9H175 543 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 BHMT2Q9H2M3 363 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 ALG13Q9NP73 1137 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 XPNPEP1Q9NQW7 623 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 DNAJB12Q9NXW2 375 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 ZMYM5Q9UJ78 669 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 NAGPAQ9UK23 515 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 SSX2IPQ9Y2D8 614 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 GIT1Q9Y2X7 761 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 COL4A4P53420 1690 aaPredicted RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 VWA3AA6NCI4 1184 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 CCDC169A6NNP5 214 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 TSPAN1O60635 241 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 ZNF623O75123 536 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 KIF4AO95239 1232 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 NPTXRO95502 500 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 SPATA31C1P0DKV0 1188 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 GLRA2P23416 452 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 ABCD1P33897 745 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 LONP1P36776 959 aaKnown RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 MBTD1Q05BQ5 628 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 STRN3Q13033 797 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 PRPF4BQ13523 1007 aaKnown RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 FOXD4L6Q3SYB3 417 aaPredicted RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 CLLU1OSQ5K130 101 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 L1TD1Q5T7N2 865 aaKnown RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 SLC27A1Q6PCB7 646 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 FOXD4L3Q6VB84 417 aaPredicted RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 CABP7Q86V35 215 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 IGSF22Q8N9C0 903 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 SPPL3Q8TCT6 385 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 GATAD2BQ8WXI9 593 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 ZNF396Q96N95 335 aaPredicted RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 TCF25Q9BQ70 676 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 TMEM175Q9BSA9 504 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 ZSCAN16Q9H4T2 348 aaPredicted RBP6.21□□□□□ -1.42
AFP-201ENST00000226359 IFT122Q9HBG6 1241 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 KCND2Q9NZV8 630 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 CD207Q9UJ71 328 aa6.21□□□□□ -1.42
AFP-201ENST00000226359 MYH9P35579 1960 aaKnown RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 TBCAO75347 108 aaKnown RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 URODP06132 367 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 SCP2P22307 547 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 NRIP1P48552 1158 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 ZNF165P49910 485 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 BCAR1P56945 870 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 GPLD1P80108 840 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 ATP11AP98196 1134 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CREMQ03060 361 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 TFF2Q03403 129 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 SMAD4Q13485 552 aaKnown RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 CBX2Q14781 532 aaPredicted RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 FAM187BQ17R55 369 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CDCA2Q69YH5 1023 aaPredicted RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 MRPL10Q7Z7H8 261 aaKnown RBP6.2□□□□□ -1.42
AFP-201ENST00000226359 DDX42Q86XP3 938 aaKnown RBP eCLIP6.2□□□□□ -1.42
AFP-201ENST00000226359 SLC39A11Q8N1S5 342 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 EFHBQ8N7U6 833 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CASP10Q92851 521 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 LPPQ93052 612 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 BICD1Q96G01 975 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CPB2Q96IY4 423 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 COLEC11Q9BWP8 271 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CWH43Q9H720 699 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 C17orf75Q9HAS0 396 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 GPRC5CQ9NQ84 441 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 KMT5AQ9NQR1 393 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 LMBRD1Q9NUN5 540 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 CCDC39Q9UFE4 941 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 DPP7Q9UHL4 492 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 IPPQ9Y573 584 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 SIP14410 1827 aa6.2□□□□□ -1.42
AFP-201ENST00000226359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.19□□□□□ -1.42
AFP-201ENST00000226359 GOLGA6L3A6NEY3 463 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 SIN3BO75182 1162 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 MBD3O95983 291 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 FAM153BP0C7A2 387 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 MYCLP1P12525 358 aaPredicted RBP6.19□□□□□ -1.42
AFP-201ENST00000226359 ATF7P17544 494 aaPredicted RBP6.19□□□□□ -1.42
AFP-201ENST00000226359 MATR3P43243 847 aaKnown RBP eCLIP6.19□□□□□ -1.42
AFP-201ENST00000226359 NRLP54845 237 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 HYAL1Q12794 435 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 GRIK3Q13003 919 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 KLHL40Q2TBA0 621 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 LONRF3Q496Y0 759 aa6.19□□□□□ -1.42
AFP-201ENST00000226359 KIAA1841Q6NSI8 718 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms