RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 PALB2Q86YC2 1186 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 CCDC150Q8NCX0 1101 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 TATDN2Q93075 761 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 PPP2R3CQ969Q6 453 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 TMEM209Q96SK2 561 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 RTP3Q9BQQ7 232 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 MRPL45Q9BRJ2 306 aaKnown RBP21.22■□□□□ 0.99
HOXA6-201ENST00000222728 CRACR2AQ9BSW2 395 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 SDCBP2Q9H190 292 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 VPS16Q9H269 839 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.22■□□□□ 0.99
HOXA6-201ENST00000222728 FNIP2Q9P278 1114 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 DSEQ9UL01 958 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 BACE2Q9Y5Z0 518 aa21.22■□□□□ 0.99
HOXA6-201ENST00000222728 PMM2O15305 246 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 LINC01565O15544 149 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 OR4Q2P0C623 313 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 NDUFV1P49821 464 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 CDR1P51861 262 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 ZNF445P59923 1031 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 CREMQ03060 361 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 WDR44Q5JSH3 913 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 LIMS2Q7Z4I7 341 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 GPR65Q8IYL9 337 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 OR10T2Q8NGX3 314 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 FAM200AQ8TCP9 573 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 KBTBD7Q8WVZ9 684 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 NDST4Q9H3R1 872 aa21.21■□□□□ 0.99
HOXA6-201ENST00000222728 EYSQ5T1H1 3165 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 P4HA2O15460 535 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 TBC1D4O60343 1298 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 ADH1AP07327 375 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 WEE2P0C1S8 567 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 SPATA31D3P0C874 917 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 EPCAMP16422 314 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 ACAT1P24752 427 aaKnown RBP21.2■□□□□ 0.98
HOXA6-201ENST00000222728 ASPAP45381 313 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 COPB1P53618 953 aaKnown RBP21.2■□□□□ 0.98
HOXA6-201ENST00000222728 CETN1Q12798 172 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 SPATA31D4Q6ZUB0 917 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 TMEM86AQ8N2M4 240 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 VN1R2Q8NFZ6 395 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 LMO3Q8TAP4 145 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 NIF3L1Q9GZT8 377 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 INTS2Q9H0H0 1204 aaKnown RBP21.2■□□□□ 0.98
HOXA6-201ENST00000222728 DDX43Q9NXZ2 648 aaKnown RBP21.2■□□□□ 0.98
HOXA6-201ENST00000222728 GCNT4Q9P109 453 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 LIMA1Q9UHB6 759 aaKnown RBP21.2■□□□□ 0.98
HOXA6-201ENST00000222728 NME7Q9Y5B8 376 aa21.2■□□□□ 0.98
HOXA6-201ENST00000222728 CAVIN2O95810 425 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 P4HA1P13674 534 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 LMO2P25791 158 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 ROR1Q01973 937 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 SKIV2LQ15477 1246 aaKnown RBP21.19■□□□□ 0.98
HOXA6-201ENST00000222728 EP400NLQ6ZTU2 488 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 DPH6Q7L8W6 267 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 THEM5Q8N1Q8 247 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 EHBP1Q8NDI1 1231 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 MAFAQ8NHW3 353 aaPredicted RBP21.19■□□□□ 0.98
HOXA6-201ENST00000222728 SNX25Q9H3E2 840 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 STXBP5LQ9Y2K9 1186 aa21.19■□□□□ 0.98
HOXA6-201ENST00000222728 WDR27A2RRH5 827 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 GABRDO14764 452 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 GLP2RO95838 553 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 PDGFRBP09619 1106 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 CPB1P15086 417 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 SLC9A1P19634 815 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 WARSP23381 471 aaKnown RBP21.18■□□□□ 0.98
HOXA6-201ENST00000222728 CLCN4P51793 760 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 APBA1Q02410 837 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 SLC8B1Q6J4K2 584 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 RNF214Q8ND24 703 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 ANKRD20A12PQ8NF67 263 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 OR6B3Q8NGW1 331 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 SLC22A17Q8WUG5 538 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 CDCA3Q99618 268 aaPredicted RBP21.18■□□□□ 0.98
HOXA6-201ENST00000222728 ARID3AQ99856 593 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 BCO2Q9BYV7 579 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 HCFC2Q9Y5Z7 792 aa21.18■□□□□ 0.98
HOXA6-201ENST00000222728 OR6C75A6NL08 312 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 GOLGA6L19H0YKK7 550 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 TGM5O43548 720 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 TACC1O75410 805 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 GLUD1P00367 558 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 TPM2P07951 284 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 GNL1P36915 607 aaPredicted RBP21.17■□□□□ 0.98
HOXA6-201ENST00000222728 LHX1P48742 406 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 RAB33AQ14088 237 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 CCDC142Q17RM4 750 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 GBP6Q6ZN66 633 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 APTXQ7Z2E3 356 aaKnown RBP21.17■□□□□ 0.98
HOXA6-201ENST00000222728 ARHGEF19Q8IW93 802 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 EFHBQ8N7U6 833 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 NT5C1BQ96P26 610 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 PGLYRP2Q96PD5 576 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 CLDND1Q9NY35 253 aa21.17■□□□□ 0.98
HOXA6-201ENST00000222728 ATP2C2O75185 946 aa21.16■□□□□ 0.98
HOXA6-201ENST00000222728 CD58P19256 250 aa21.16■□□□□ 0.98
HOXA6-201ENST00000222728 PSMC1P62191 440 aaKnown RBP21.16■□□□□ 0.98
HOXA6-201ENST00000222728 ORC1Q13415 861 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms