RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CXCL9Q07325 125 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 BYSLQ13895 437 aaKnown RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 NAPEPLDQ6IQ20 393 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 LRRC8EQ6NSJ5 796 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 COG1Q8WTW3 980 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 ZC3H11AO75152 810 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 ITIH2P19823 946 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 FGFR4P22455 802 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 C6orf10Q5SRN2 563 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 BHMTQ93088 406 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 OPTNQ96CV9 577 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 OSBPL8Q9BZF1 889 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 CYP4F11Q9HBI6 524 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 METTL5Q9NRN9 209 aaKnown RBP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 DDIT4Q9NX09 232 aa19.81■□□□□ 0.76
SMPD3-201ENST00000219334 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMPD3-201ENST00000219334 SPRP35270 261 aaPredicted RBP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 NFIAQ12857 509 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 LRRC14Q15048 493 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 NAB2Q15742 525 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 FBXO32Q969P5 355 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 TRABDQ9H4I3 376 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 IPPQ9Y573 584 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 A0A1B0GTH6 734 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 NKRFO15226 690 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 CHGBP05060 677 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 ABHD8Q96I13 439 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 STN1Q9H668 368 aaKnown RBP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 WDCPQ9H6R7 721 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 STX7O15400 261 aaKnown RBP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 MEFVO15553 781 aaPredicted RBP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 POLBP06746 335 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 SLC26A2P50443 739 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 EIF2B5Q13144 721 aaKnown RBP19.8■□□□□ 0.76
SMPD3-201ENST00000219334 PTK6Q13882 451 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 RGS9BPQ6ZS82 235 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 ZNF507Q8TCN5 953 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 GMNCA6NCL1 334 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 ALDH1A2O94788 518 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 ARIH2O95376 493 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 NAMPTP43490 491 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 BOLA3Q53S33 107 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 CCDC90BQ9GZT6 254 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 SLC25A13Q9UJS0 675 aa19.8■□□□□ 0.76
SMPD3-201ENST00000219334 F5H5T6 163 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 RNASEH1O60930 286 aaKnown RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 KRT4P19013 534 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 CTXN3Q4LDR2 81 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 GIMAP4Q9NUV9 329 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 PKD2L2Q9NZM6 624 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 MANSC4A6NHS7 340 aaPredicted RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 CHRM3P20309 590 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 IL10P22301 178 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 PEX19P40855 299 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 NBPF12Q5TAG4 269 aaPredicted RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 C4orf22Q6V702 233 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 FEZF2Q8TBJ5 459 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 GRAMD1AQ96CP6 724 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 TRPM5Q9NZQ8 1165 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 HEATR9A2RTY3 570 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 H0Y3Z8 333 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 RGL2O15211 777 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 CST8O60676 142 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 CCDC144BQ3MJ40 725 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 RABGAP1LQ5R372 815 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 TASP1Q9H6P5 420 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 NEU2Q9Y3R4 380 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 FRMD3A2A2Y4 597 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 SMAPO00193 183 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 ASS1P00966 412 aaKnown RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 KLRC1P26715 233 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 OTULINQ96BN8 352 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 SNX12Q9UMY4 172 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 GTPBP10A4D1E9 387 aaKnown RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 SUPT3HB4E1H0 165 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 M0QYT0 321 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 MPZL3Q6UWV2 235 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 FAM161BQ96MY7 647 aa19.79■□□□□ 0.76
SMPD3-201ENST00000219334 FAM32AQ9Y421 112 aaKnown RBP19.79■□□□□ 0.76
SMPD3-201ENST00000219334 PRR23AA6NEV1 266 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 RBP3P10745 1247 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 RFX5P48382 616 aaPredicted RBP19.78■□□□□ 0.76
SMPD3-201ENST00000219334 LRRC74AQ0VAA2 488 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 AMHR2Q16671 573 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 ATP6V1G3Q96LB4 118 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 DSEQ9UL01 958 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 VPS9D1Q9Y2B5 631 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 TMX2Q9Y320 296 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 PCDHB12Q9Y5F1 795 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 GOLGA8RI6L899 631 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 VCAM1P19320 739 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 NBPF9Q3BBW0 867 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 CYB561D2O14569 222 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 ANXA9O76027 345 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 PTGER2P43116 358 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 CUL2Q13617 745 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 TMC7Q7Z402 723 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 MIB1Q86YT6 1006 aa19.78■□□□□ 0.76
SMPD3-201ENST00000219334 KIAA1257Q9ULG3 409 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms