RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 FAM49BQ9NUQ9 324 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 SLC5A4Q9NY91 659 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 NUB1Q9Y5A7 615 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 AHDC1Q5TGY3 1603 aaPredicted RBP13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 XPOTO43592 962 aaKnown RBP13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 ZNF862O60290 1169 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 CIB2O75838 187 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 LYPLA2O95372 231 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 RAP1GAPP47736 663 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 CCNG2Q16589 344 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 ATP13A4Q4VNC1 1196 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 KCNV1Q6PIU1 500 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 C3orf62Q6ZUJ4 267 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 FBXO16Q8IX29 292 aaPredicted RBP13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 PARP9Q8IXQ6 854 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 CDKL2Q92772 493 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 DCLK3Q9C098 648 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 IFT122Q9HBG6 1241 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 RAB6BQ9NRW1 208 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 ARL2BPQ9Y2Y0 163 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 A8MXQ7 604 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 APRTP07741 180 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 GLRA2P23416 452 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 DNAJC3Q13217 504 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 KLHL38Q2WGJ6 581 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 ZNF572Q7Z3I7 529 aaPredicted RBP13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 C12orf56Q8IXR9 622 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 EXD1Q8NHP7 514 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 MICAL1Q8TDZ2 1067 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 MAML1Q92585 1016 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 CHMP2BQ9UQN3 213 aa13.01□□□□□ -0.33
TM9SF4-201ENST00000217315 ADCY3O60266 1144 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 PPFIA2O75334 1257 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 KRT37O76014 449 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 ADORA2BP29275 332 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 TGFB2P61812 414 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 DRP2Q13474 957 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 TMEM132DQ14C87 1099 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
TM9SF4-201ENST00000217315 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 FAM71DQ8N9W8 422 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 OR5B17Q8NGF7 314 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 WDR35Q9P2L0 1181 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 COPEO14579 308 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 TRAPPC3O43617 180 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 CYP1A2P05177 515 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 LAMTOR4Q0VGL1 99 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 ZACNQ401N2 412 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 SLFN11Q7Z7L1 901 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 PRUNE1Q86TP1 453 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 ARHGAP24Q8N264 748 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 DNAAF3Q8N9W5 541 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 PWWP2AQ96N64 755 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 MYH15Q9Y2K3 1946 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 HBP1O60381 514 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 PEX10O60683 326 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 CXCL8P10145 99 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 CDH8P55286 799 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 METTL7BQ6UX53 244 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 CPNE8Q86YQ8 564 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 KIF2BQ8N4N8 673 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 SLC13A1Q9BZW2 595 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 PORCNQ9H237 461 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 SLC40A1Q9NP59 571 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 AVENQ9NQS1 362 aaPredicted RBP13□□□□□ -0.33
TM9SF4-201ENST00000217315 PCYOX1Q9UHG3 505 aa13□□□□□ -0.33
TM9SF4-201ENST00000217315 DCDC2CA8MYV0 355 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 F8VP50 259 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 KCNN4O15554 427 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 TFDP3Q5H9I0 405 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ACTL9Q8TC94 416 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 HPDLQ96IR7 371 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ERAP1Q9NZ08 941 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 CTNNAL1Q9UBT7 734 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 LRP5O75197 1615 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 GLI3P10071 1580 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 UBA1P22314 1058 aaKnown RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ALDH5A1P51649 535 aaPredicted RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 GPR162Q16538 588 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 PACS2Q86VP3 889 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 HELQQ8TDG4 1101 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 SGSM3Q96HU1 749 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 TRIM55Q9BYV6 548 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 XPO7Q9UIA9 1087 aaKnown RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 DNPEPQ9ULA0 475 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ZMYM2Q9UBW7 1377 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ASB14A6NK59 587 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 H0Y3Z8 333 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 PDGFRBP09619 1106 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 ZSCAN5DPP0CG00 497 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 CTCFP49711 727 aaPredicted RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 OAZ1P54368 228 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 RBP5P82980 135 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 TMPRSS15P98073 1019 aa12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 OTUD4Q01804 1114 aaKnown RBP12.99□□□□□ -0.33
TM9SF4-201ENST00000217315 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms