RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 MSTO1Q9BUK6 570 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 HAPLN2Q9GZV7 340 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 TRABDQ9H4I3 376 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 NOP53Q9NZM5 478 aaKnown RBP14.06□□□□□ -0.16
SRP54-201ENST00000216774 SLC24A2Q9UI40 661 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 C15orf41Q9Y2V0 281 aa14.06□□□□□ -0.16
SRP54-201ENST00000216774 SIP14410 1827 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 SPATA31C2B4DYI2 1134 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 PI4K2BG5E9Z4 385 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 K7ERI5 159 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 ATP2A1O14983 1001 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 KRT10P13645 584 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 ATF7P17544 494 aaPredicted RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 YARSP54577 528 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 RPL7AP62424 266 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 LACTBP83111 547 aaPredicted RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 GPS1Q13098 491 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 NCOA4Q13772 614 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 OASLQ15646 514 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 PDK4Q16654 411 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 GNPTABQ3T906 1256 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 SUPT20HL1Q3ZLR7 823 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 RNASEH2BQ5TBB1 312 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 KAZNQ674X7 775 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 CENPUQ71F23 418 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 NIM1KQ8IY84 436 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 UBR7Q8N806 425 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 GLIS1Q8NBF1 620 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 DEPTORQ8TB45 409 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 SMC6Q96SB8 1091 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 IMPG2Q9BZV3 1241 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 PHACTR1Q9C0D0 580 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 MYOZ2Q9NPC6 264 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 KLHL11Q9NVR0 708 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 DDX56Q9NY93 547 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.05□□□□□ -0.16
SRP54-201ENST00000216774 CNTNAP2Q9UHC6 1331 aa14.05□□□□□ -0.16
SRP54-201ENST00000216774 TCRBV5S1A1TA0A578 114 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 WFS1O76024 890 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ANP32DO95626 131 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 GBP2P32456 591 aaPredicted RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 AP3M2P53677 418 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ADCY1Q08828 1119 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 PIGHQ14442 188 aaPredicted RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 ACCSLQ4AC99 568 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ZFYVE27Q5T4F4 411 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 SMYD5Q6GMV2 418 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 DNAJC24Q6P3W2 148 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 KIF2BQ8N4N8 673 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 NIPA2Q8N8Q9 360 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ANKLE1Q8NAG6 615 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 REPS2Q8NFH8 660 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ZNF518BQ9C0D4 1074 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 DHX33Q9H6R0 707 aaKnown RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 SSU72Q9NP77 194 aaKnown RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 FETUBQ9UGM5 382 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 USH1CQ9Y6N9 552 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 IVNS1ABPQ9Y6Y0 642 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 PARP14Q460N5 1801 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ADGRA2Q96PE1 1338 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 hCG_1818297A0A087WSY0 165 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 GLRA2P23416 452 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ARL2P36404 184 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 SLC8A3P57103 927 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ATP11AP98196 1134 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ZNF252P-AS1Q0IIN9 211 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 MYO1EQ12965 1108 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 MOGSQ13724 837 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 SNRNP48Q6IEG0 339 aaKnown RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 FAM47EQ6ZV65 393 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 ASAP3Q8TDY4 903 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 WNK4Q96J92 1243 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 PAIP2Q9BPZ3 127 aaKnown RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 MAF1Q9H063 256 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 LRMDAQ9H2I8 198 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 PSMC3IPQ9P2W1 217 aaPredicted RBP14.04□□□□□ -0.16
SRP54-201ENST00000216774 PHTF1Q9UMS5 762 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 L3MBTL1Q9Y468 752 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 TELO2Q9Y4R8 837 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 KIAA1217Q5T5P2 1943 aa14.04□□□□□ -0.16
SRP54-201ENST00000216774 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 POC1B-GALNT4F8VUJ3 575 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 SPAG7O75391 227 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 DCTN3O75935 186 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ZSCAN5DPP0CG00 497 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 TCF4P15884 667 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 KRT15P19012 456 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 IBSPP21815 317 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 ALDH3A1P30838 453 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 SSTR3P32745 418 aaPredicted RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 SP4Q02446 784 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 PKN2Q16513 984 aaKnown RBP14.03□□□□□ -0.16
SRP54-201ENST00000216774 PARP6Q2NL67 630 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 SPDYAQ5MJ70 313 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 ZBTB41Q5SVQ8 909 aa14.03□□□□□ -0.16
SRP54-201ENST00000216774 PCGF5Q86SE9 256 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms