RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ARHGEF7Q14155 803 aa11.97□□□□□ -0.49
PKP2-201ENST00000070846 KIAA0319LQ8IZA0 1049 aa11.97□□□□□ -0.49
PKP2-201ENST00000070846 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
PKP2-201ENST00000070846 GOLPH3Q9H4A6 298 aa11.97□□□□□ -0.49
PKP2-201ENST00000070846 AMACRQ9UHK6 382 aa11.97□□□□□ -0.49
PKP2-201ENST00000070846 ONECUT3O60422 494 aaPredicted RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 CHEK2O96017 543 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 ZBTB48P10074 688 aaPredicted RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 MCF2P10911 925 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 CHRNA3P32297 505 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 RAP1GAPP47736 663 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 LHX1P48742 406 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 RASSF2P50749 326 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 NR1H3Q13133 447 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 MDH1BQ5I0G3 518 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 AMIGO3Q86WK7 504 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 CCNYL1Q8N7R7 359 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 DDI1Q8WTU0 396 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 CALR3Q96L12 384 aaKnown RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 FAM118BQ9BPY3 351 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 SYT15Q9BQS2 421 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 DSEQ9UL01 958 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 SLC30A1Q9Y6M5 507 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 SLC12A8A0AV02 714 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 CCDC151A5D8V7 595 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 HMGCRP04035 888 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 VDRP11473 427 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 OCRLQ01968 901 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 CYP24A1Q07973 514 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 ZNF177Q13360 481 aaPredicted RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 CUL1Q13616 776 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 ZNF410Q86VK4 478 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 ZBED8Q8IZ13 594 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 TTC17Q96AE7 1141 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 MRPL9Q9BYD2 267 aaKnown RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 CATSPERBQ9H7T0 1116 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 MED4Q9NPJ6 270 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 KRT82Q9NSB4 513 aa11.96□□□□□ -0.49
PKP2-201ENST00000070846 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.96□□□□□ -0.49
PKP2-201ENST00000070846 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.96□□□□□ -0.49
PKP2-201ENST00000070846 NR1I3Q14994 352 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 HABP4Q5JVS0 413 aaKnown RBP11.96□□□□□ -0.5
PKP2-201ENST00000070846 SH2D4BQ5SQS7 431 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 ARHGAP18Q8N392 663 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 SPATA18Q8TC71 538 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 UCMAQ8WVF2 138 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 FGD4Q96M96 766 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 CAPS2Q9BXY5 557 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 NUF2Q9BZD4 464 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 OSBPL8Q9BZF1 889 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 KIAA1257Q9ULG3 409 aa11.96□□□□□ -0.5
PKP2-201ENST00000070846 SCNN1GP51170 649 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
PKP2-201ENST00000070846 HSDL1Q3SXM5 330 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 IZUMO3Q5VZ72 239 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ZPBP2Q6X784 338 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.95□□□□□ -0.5
PKP2-201ENST00000070846 SZRD1Q7Z422 152 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 FAM131BQ86XD5 332 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 TTC8Q8TAM2 541 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 FEZF2Q8TBJ5 459 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ELMO3Q96BJ8 720 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 RMDN2Q96LZ7 410 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 PNMA5Q96PV4 448 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 STK38LQ9Y2H1 464 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 PRRC2BQ5JSZ5 2229 aaKnown RBP11.95□□□□□ -0.5
PKP2-201ENST00000070846 COPEO14579 308 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 TOMM70O94826 608 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 SLC2A3P11169 496 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
PKP2-201ENST00000070846 NAB2Q15742 525 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 CENPPQ6IPU0 288 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 KCNK18Q7Z418 384 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ATP6V0D2Q8N8Y2 350 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
PKP2-201ENST00000070846 ASB7Q9H672 318 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 INTS13Q9NVM9 706 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ZFATQ9P243 1243 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ALG6Q9Y672 507 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 COMTP21964 271 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 BCAT1P54687 386 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 BOLA3Q53S33 107 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 NECAB2Q7Z6G3 386 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 RCOR2Q8IZ40 523 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 ATP11CQ8NB49 1132 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 SPIRE2Q8WWL2 714 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 SEMA6BQ9H3T3 888 aa11.95□□□□□ -0.5
PKP2-201ENST00000070846 EGFRP00533 1210 aa11.94□□□□□ -0.5
PKP2-201ENST00000070846 TAC1P20366 129 aa11.94□□□□□ -0.5
PKP2-201ENST00000070846 CDH8P55286 799 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms