RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TJP3O95049 919 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 PYGLP06737 847 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 TNNI1P19237 187 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 FAM196AQ6ZSG2 479 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 RIBC1Q8N443 379 aaPredicted RBP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 B4GALNT2Q8NHY0 566 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 THTPAQ9BU02 230 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 SYNCQ9H7C4 482 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 EURLQ9NYK6 297 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 KANSL3Q9P2N6 904 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 IKBKGQ9Y6K9 419 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 ATAD5Q96QE3 1844 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 PRPF4O43172 522 aaKnown RBP eCLIP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 TRAF1Q13077 416 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 CUL3Q13618 768 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 FAM213AQ9BRX8 229 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 C1orf112Q9NSG2 853 aa21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 PPARGC1AQ9UBK2 798 aaKnown RBP21.16■□□□□ 0.98
PPP1R3F-201ENST00000055335 GRIN3BO60391 1043 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 PROSCO94903 275 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZWINTO95229 277 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 RPL7AP62424 266 aaKnown RBP21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 HIF1AQ16665 826 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 XKR9Q5GH70 373 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 APOBEC3HQ6NTF7 200 aaKnown RBP21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 TMEM270Q6UE05 265 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 DDX1Q92499 740 aaKnown RBP21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 FAM136AQ96C01 138 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 PAFAH2Q99487 392 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 EPAS1Q99814 870 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 HOMER2Q9NSB8 354 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 ASB3Q9Y575 518 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZHX2Q9Y6X8 837 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 LPXNO60711 386 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 OPHN1O60890 802 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 GYS1P13807 737 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 GSTT1P30711 240 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 LIN9Q5TKA1 542 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 FBXO27Q8NI29 283 aa21.15■□□□□ 0.98
PPP1R3F-201ENST00000055335 MT-ND3P03897 115 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 MUTP22033 750 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZNF394Q53GI3 561 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 WDR11Q9BZH6 1224 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 PCMTD2Q9NV79 361 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 NYAP2Q9P242 653 aa21.14■□□□□ 0.98
PPP1R3F-201ENST00000055335 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 TYROBPO43914 113 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 KLRC2P26717 231 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 DSG3P32926 999 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 NRLP54845 237 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 GEMIN4P57678 1058 aaKnown RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 JAG1P78504 1218 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 CTAGE3PQ8IX95 158 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 VTI1AQ96AJ9 217 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 NMUR2Q9GZQ4 415 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 IQCGQ9H095 443 aaKnown RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 UBE4BO95155 1302 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 P4HA2O15460 535 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 ADSSP30520 456 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 GCLCP48506 637 aaPredicted RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 IRX4P78413 519 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 KLF1Q13351 362 aaPredicted RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 CTC1Q2NKJ3 1217 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 SGSM1Q2NKQ1 1148 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 SMTNL2Q2TAL5 461 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 NLRX1Q86UT6 975 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 TTC25Q96NG3 672 aa21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 ZNF184Q99676 751 aaPredicted RBP21.14■□□□□ 0.97
PPP1R3F-201ENST00000055335 DENND3A2RUS2 1198 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 MAGEA13PA6NCF6 341 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 RNF8O76064 485 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 RILPQ96NA2 401 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 PI4KBQ9UBF8 816 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 AGTPBP1Q9UPW5 1226 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 CHMP2BQ9UQN3 213 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 hCG_2014768A0A024R1R8 64 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 FCHO1O14526 889 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 HNRNPDLO14979 420 aaKnown RBP21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 SLC1A1P43005 524 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 STAT2P52630 851 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 ALCAMQ13740 583 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 DCUN1D2Q6PH85 259 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 GORASP1Q9BQQ3 440 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 SMYD3Q9H7B4 428 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 ZNF395Q9H8N7 513 aaPredicted RBP21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 SAR1AQ9NR31 198 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 PCDHB4Q9Y5E5 795 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 IVNS1ABPQ9Y6Y0 642 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 ARHGAP42A6NI28 874 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 TXNDC9O14530 226 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 LIASO43766 372 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 CRKP46108 304 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 ARL4CP56559 192 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 ANKRD22Q5VYY1 191 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 TXNRD3NBQ6F5E7 133 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 SH3TC2Q8TF17 1288 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 SENP1Q9P0U3 644 aa21.13■□□□□ 0.97
PPP1R3F-201ENST00000055335 POTEJP0CG39 1038 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms