RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TMEM63BQ5T3F8 832 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 TTC19Q6DKK2 380 aaPredicted RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 TAPT1Q6NXT6 567 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF365Q70YC5 407 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 C3orf20Q8ND61 904 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 BCAS4Q8TDM0 211 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ART4Q93070 314 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ZBTB10Q96DT7 871 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 SNF8Q96H20 258 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 PARK7Q99497 189 aaKnown RBP8.76□□□□□ -1.01
VAMP3-201ENST00000054666 OSBPL8Q9BZF1 889 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 DCLK3Q9C098 648 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 ASB7Q9H672 318 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 IFT122Q9HBG6 1241 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 WHRNQ9P202 907 aa8.76□□□□□ -1.01
VAMP3-201ENST00000054666 RBM47A0AV96 593 aaKnown RBP8.75□□□□□ -1.01
VAMP3-201ENST00000054666 VTNP04004 478 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 ITGB3P05106 788 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 PAEPP09466 180 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 ATICP31939 592 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 TAS2R40P59535 323 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 CAV1Q03135 178 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 LMNB2Q03252 620 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 MKRN3Q13064 507 aaKnown RBP8.75□□□□□ -1.01
VAMP3-201ENST00000054666 PIGHQ14442 188 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-201ENST00000054666 WDR72Q3MJ13 1102 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 EMC10Q5UCC4 262 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 DAB2IPQ5VWQ8 1189 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 JADE1Q6IE81 842 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 APBB1IPQ7Z5R6 666 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-201ENST00000054666 ANKRD23Q86SG2 305 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 CCDC25Q86WR0 208 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 BBOF1Q8ND07 529 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 ATL2Q8NHH9 583 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 ATG4AQ8WYN0 398 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 HEMGNQ9BXL5 484 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 STMN4Q9H169 189 aaPredicted RBP8.75□□□□□ -1.01
VAMP3-201ENST00000054666 PDZD7Q9H5P4 517 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 SYNCQ9H7C4 482 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 CHST7Q9NS84 486 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 MORF4L1Q9UBU8 362 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 RSPH14Q9UHP6 348 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 POLIQ9UNA4 740 aa8.75□□□□□ -1.01
VAMP3-201ENST00000054666 TMEM191CA6NGB0 347 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 LACTBL1A8MY62 500 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 H3BRB1 525 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GPR25O00155 361 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GJB6O95452 261 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 RARGP13631 454 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ATF7P17544 494 aaPredicted RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ITIH2P19823 946 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 FGFR4P22455 802 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 MDH1P40925 334 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 RPL7AP62424 266 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 PPP2R2AP63151 447 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ADCY2Q08462 1091 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 KLF1Q13351 362 aaPredicted RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TMEM132DQ14C87 1099 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CCNG2Q16589 344 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 SKIDA1Q1XH10 827 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 LRRC38Q5VT99 294 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 MTHFD1LQ6UB35 978 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GPR142Q7Z601 462 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TMEM192Q8IY95 271 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 RCOR2Q8IZ40 523 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 LINC01465Q8N7H1 131 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CCDC89Q8N998 374 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 C1orf127Q8N9H9 656 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 OR6J1Q8NGC5 347 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CCHCR1Q8TD31 782 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CPB2Q96IY4 423 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 BCO2Q9BYV7 579 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TUT1Q9H6E5 874 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CYP3A43Q9HB55 503 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 NOVA2Q9UNW9 492 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 NDUFAB1O14561 156 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TJP3O95049 919 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 IQCF3P0C7M6 154 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ARF4P18085 180 aaPredicted RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 LSP1P33241 339 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 FKBP1BP68106 108 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GRB14Q14449 540 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GRIK4Q16099 956 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 AMHR2Q16671 573 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 DGKDQ16760 1214 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CYP4A22Q5TCH4 519 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 SCARA3Q6AZY7 606 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 CEP128Q6ZU80 1094 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TRMT10CQ7L0Y3 403 aaKnown RBP8.74□□□□□ -1.01
VAMP3-201ENST00000054666 GSTA5Q7RTV2 222 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 ZNF410Q86VK4 478 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 NT5DC4Q86YG4 428 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TTC39CQ8N584 583 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 BRI3BPQ8WY22 251 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 TFAP2BQ92481 460 aa8.74□□□□□ -1.01
VAMP3-201ENST00000054666 RNF25Q96BH1 459 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms