RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Phka2Q8BWJ3 1235 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Znf467Q8JZL0 594 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Mcoln2Q8K595 566 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Cdk5rap3Q99LM2 503 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Katnbl1Q9CWJ3 299 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Capn12Q9ER56 720 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Smok2bQ9QYZ3 484 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Smok2aQ9QYZ6 504 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Atp6v0a1Q9Z1G4 839 aaKnown RBP14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Ptgdr2Q9Z2J6 382 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 Pck1Q9Z2V4 622 aa14.09□□□□□ -0.15
Pdlim5-208ENSMUST00000196220 0610012G03RikA0A0J9YTR2 95 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Lipo2D3YY49 398 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cyp27b1O35084 507 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Kif5cP28738 956 aaKnown RBP14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 SftpdP50404 374 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Stmn1P54227 149 aaKnown RBP14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Slc12a1P55014 1095 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Fermt1P59113 677 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mybpc2Q5XKE0 1136 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Foxo6Q70KY4 559 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 FtoQ8BGW1 502 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mical2Q8BML1 960 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 HhatQ8BMT9 499 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Q8BZE1 841 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gpc3Q8CFZ4 579 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pcdhb1Q91Y08 818 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ascc1Q9D8Z1 356 aaKnown RBP14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Phf2Q9WTU0 1096 aa14.08□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Kiaa1522A2A7S8 1013 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tbc1d16A2ABG4 766 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mroh5E9PUJ8 762 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Vmn2r87E9PZX4 848 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rasgrf1P27671 1262 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 MagohP61327 146 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Zhx1P70121 873 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Adcy8P97490 1249 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mark2Q05512 776 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Hace1Q3U0D9 909 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Zbtb17Q60821 794 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Dus1lQ8C2P3 475 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Spata16Q8C636 571 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Syt15Q8C6N3 418 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Slc15a5Q8CBB2 566 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Vopp1Q8R1C3 172 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mtss1Q8R1S4 759 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Slc26a7Q8R2Z3 656 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gle1Q8R322 699 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 PawrQ925B0 333 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mcrs1Q99L90 462 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tpgs1Q99MS8 303 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 MagohbQ9CQL1 146 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Psma8Q9CWH6 250 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Adgrf4Q9D2L6 698 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tmem86aQ9D8N3 241 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Hs6st3Q9QYK4 470 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Anapc7Q9WVM3 565 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cntnap5aQ0V8T9 1304 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cdr2lA2A6T1 465 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Olfr1305A2AVW3 312 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Speer2E9Q9U2 264 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Casp14O89094 257 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Abcb1bP06795 1276 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Tbxas1P36423 533 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Gnl1P36916 607 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Psmc1P62192 440 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pi4k2aQ2TBE6 479 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rnf157Q3TEL6 685 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pid1Q3UBG2 217 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Elf3Q3UPW2 391 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Orc2Q60862 576 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Rab34Q64008 259 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Krt12Q64291 487 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 NostrinQ6WKZ7 506 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Olfr670Q7TRP3 312 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Pum3Q8BKS9 647 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Slc9a4Q8BUE1 797 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Map1sQ8C052 973 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cyp2d26Q8CIM7 500 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Il36gQ8R460 164 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ugp2Q91ZJ5 508 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 St13Q99L47 371 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 MutyhQ99P21 515 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ndufab1Q9CR21 156 aa14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Mrpl4Q9DCU6 294 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Trpm7Q923J1 1863 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cntnap4Q99P47 1310 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Patl2A2ARM1 529 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ttll8A4Q9F1 832 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ccdc24E9PUW8 296 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Srsf11E9Q6E5 511 aaKnown RBP14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 F6Y6L6 278 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Kcnk16G5E845 292 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Casq2O09161 415 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 NfkbieO54910 364 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cxcl9P18340 126 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Ces1cP23953 554 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Hoxb13P70321 286 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Oas1fQ14AZ4 364 aa14.06□□□□□ -0.16
Pdlim5-208ENSMUST00000196220 Cdca2Q14B71 982 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms