RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Gm14851Q5ERJ0 116 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Pcbp2Q61990 362 aaKnown RBP9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mrpl42Q9CPV3 142 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ulk2Q9QY01 1037 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Zmynd12A2BGJ5 363 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam71e2L7N480 754 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 YwhaeP62259 255 aaKnown RBP9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam160a2Q3U2I3 975 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ntrk1Q3UFB7 799 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cnot7Q60809 285 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Inppl1Q6P549 1257 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nsun6Q7TS68 476 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ap3m2Q8R2R9 418 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TbccQ8VCN9 341 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ddx28Q9CWT6 540 aaKnown RBP9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tmx2Q9D710 295 aaKnown RBP9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rnf225Q9D7D1 332 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Btbd17Q9DB72 478 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccnb3Q810T2 1396 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt78E9Q0F0 1068 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 BtkP35991 659 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt6aP50446 553 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Map3k8Q07174 467 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Znf667Q2TL60 609 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Clec4a4Q5YIR8 236 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Stambpl1Q76N33 436 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyth4Q80YW0 393 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fgd2Q8BY35 655 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Emilin1Q99K41 1017 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyp4f15Q99N18 534 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Erp27Q9D8U3 272 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Coro1cQ9WUM4 474 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Bpnt1Q9Z0S1 308 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Btbd19S4R1I0 287 aa9.37□□□□□ -0.91
Clcn3-202ENSMUST00000056508 DroshaQ5HZJ0 1373 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 FanceB8JJD6 213 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sumo1P63166 101 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Psmd11Q8BG32 422 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Klhl2Q8JZP3 593 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Nsmce1Q9D720 266 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tfap4Q9JIZ5 338 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Clrn2B2RVW2 232 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Erich1E9PY43 332 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm14548E9Q1Z6 680 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rps6ka1P18653 724 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Tnfrsf9P20334 256 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Msx2Q03358 267 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dok6Q2MHE5 331 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ceacam5Q3UKK2 947 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Actr3bQ641P0 418 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Dlgap2Q8BJ42 1059 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 NcaphQ8C156 731 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Twf1Q91YR1 350 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Prpf3Q922U1 683 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mto1Q923Z3 669 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ppp1r2Q9DCL8 206 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Il21Q9ES17 146 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mpp2Q9WV34 552 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Serpina3jD3Z451 420 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cyp4a31F8WGU9 509 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 DtnbO70585 659 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PrkacaP05132 351 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Alppl2P24823 529 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Znf800Q0VEE6 662 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Cd300lgQ1ERP8 331 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ddx31Q6NZQ2 687 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krit1Q6S5J6 736 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Polr2eQ80UW8 210 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 1700001J03RikQ80ZR8 219 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Btbd6Q8K2J9 488 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ssh3Q8K330 649 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Usp11Q99K46 921 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Bloc1s2Q9CWG9 143 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sf3a3Q9D554 501 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Rnf14Q9JI90 485 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ca5bQ9QZA0 317 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm340F6RGI3 1242 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gm3415J3QMS8 315 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Aff2O55112 1272 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 TfamP40630 243 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 LumP51885 338 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 PctpP53808 214 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sox13Q04891 613 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Gramd2aQ3V3G7 320 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Lrrc47Q505F5 581 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ccnl1Q52KE7 532 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Stxbp2Q64324 593 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Armcx2Q6A058 784 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Magee1Q6PCZ4 918 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Olfr1415Q7TQS4 311 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Olfr798Q7TRH8 311 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ubp1Q811S7 540 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Mrps27Q8BK72 415 aaKnown RBP9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Sertm1Q8CD78 107 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Krt79Q8VED5 531 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Snx9Q91VH2 595 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Ppp1r3aQ99MR9 1089 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Fam90a1bQ9D4F3 419 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 Stx6Q9JKK1 255 aa9.36□□□□□ -0.91
Clcn3-202ENSMUST00000056508 QkiQ9QYS9 341 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms