RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Cyp39a1Q9JKJ9 470 aa10.32□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pdzrn4E9PUZ9 1014 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rasgrf1P27671 1262 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cst8P32766 142 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Kif5aP33175 1027 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dynlt1P51807 113 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zscan2Q07230 614 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 DeptorQ570Y9 409 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Grm6Q5NCH9 871 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tcf12Q61286 706 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Arhgef18Q6P9R4 1021 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm2163Q6PCY5 473 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Smg5Q6ZPY2 1017 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Bri3bpQ8BXV2 253 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 OafQ8QZR4 282 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Psmd6Q99JI4 389 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mrps22Q9CXW2 359 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mxra7Q9CZH7 178 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cep83Q9D5R3 692 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tex9Q9D845 387 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 1700013H16RikQ9DAC5 291 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mical3Q8CJ19 1993 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zscan4-ps1A0A1C7CYV3 506 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zscan4dA7KBS4 506 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ppp1r36D3Z0R2 411 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Taf4bG5E8Z2 855 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 E2f6O54917 272 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mmp13P33435 472 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Actr2P61161 394 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Casp7P97864 303 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 VcpQ01853 806 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gbp8Q2V6D6 525 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ugt3a1Q3UP75 523 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zscan4fQ3URS2 506 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Lipo3Q3UT41 399 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm5168Q4KL04 211 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Spa17Q62252 149 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dync1li2Q6PDL0 492 aaKnown RBP10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Zscan4cQ80VJ6 506 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Siglec10Q80ZE3 688 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rcn2Q8BP92 320 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Emc2Q9CRD2 297 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Serpinb3bQ9D1Q5 387 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 IydQ9DCX8 285 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Atrnl1Q6A051 1378 aa10.31□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 IqccA2ADZ8 418 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Arhgef10lA2AWP8 1280 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Impa1O55023 277 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Psen1P49769 467 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Mylk3Q3UIZ8 795 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Snx19Q6P4T1 997 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Orai3Q6P8G8 290 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cacna2d2Q6PHS9 1154 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tdpoz2Q717B2 364 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pnpt1Q8K1R3 783 aaKnown RBP10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rin1Q921Q7 763 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Med10Q9CXU0 135 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Kifc1Q9QWT9 674 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Diaph3Q9Z207 1171 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm11985A0A1B0GS61 206 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Cdr2lA2A6T1 465 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 ThbdP15306 577 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Sash1P59808 1230 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Pfkfb2P70265 519 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm29609Q3UU56 907 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Frmd5Q6P5H6 517 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gpatch2lQ6PE65 482 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Chmp2bQ8BJF9 213 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gtf3c2Q8BL74 907 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gpc5Q8CAL5 572 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Col23a1Q8K4G2 532 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Snapc2Q91XA5 359 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 HlcsQ920N2 722 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tekt2Q922G7 430 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ptdss1Q99LH2 473 aaKnown RBP10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tdrd1Q99MV1 1172 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rsrc1Q9DBU6 334 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rbp7Q9EPC5 134 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 PrccQ9EQC8 491 aaKnown RBP10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Sfmbt1Q9JMD1 863 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Rnf25Q9QZR0 456 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Plekhg4A0A1L1SU27 1217 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ripor3A1L3T7 938 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Clca3bE9PUL3 1044 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm4841E9QAA8 417 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gm3460E9QAI8 215 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Aoc3O70423 765 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 RarbP22605 482 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Wnt10bP48614 389 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Dab2P98078 766 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Plk1Q07832 603 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Kif11Q6P9P6 1052 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Ush1gQ80T11 461 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Il33Q8BVZ5 266 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Slc7a14Q8BXR1 771 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Hectd2Q8CDU6 774 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Tmem68Q9D850 329 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Asb1Q9WV74 336 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Gadd45gQ9Z111 159 aa10.3□□□□□ -0.76
Ccdc40-202ENSMUST00000053440 Abcb11Q9QY30 1321 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms