RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Podxl2Q8CAE9 603 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cables1Q9ESJ1 568 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 GssP51855 474 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 HarsQ61035 509 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Sema5aQ62217 1077 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Krit1Q6S5J6 736 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 1700001K19RikQ80ZT1 219 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cnksr3Q8BMA3 555 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Cyp2d26Q8CIM7 500 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Unc5bQ8K1S3 945 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Trpv6Q91WD2 767 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Slamf8Q9D3G2 278 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Rnf138rt1Q9D9M9 248 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Dusp6Q9DBB1 381 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Fbxo17Q9QZM8 286 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm28036V9GXJ1 658 aa24.28■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm28919A0A087WP35 240 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Hsd17b14E9Q3D4 273 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm3383J3QQ59 259 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Tnnc1P19123 161 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ranbp1P34022 203 aaKnown RBP24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ice2Q3UZ18 988 aaKnown RBP24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Olfr389Q7TRX7 312 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Ubxn6Q99PL6 442 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Spata17Q9D552 379 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Tmem86aQ9D8N3 241 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 DcpsQ9DAR7 338 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Scyl3Q9DBQ7 735 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Znf394Q9Z1D9 521 aa24.27■■□□□ 1.48
Upf3a-201ENSMUST00000043767 Gm4297D3YWB7 211 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Vmn2r1O70410 912 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Slc12a1P55014 1095 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ugt1a2P70691 533 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cct5P80316 541 aaKnown RBP24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Erich4Q3UNU4 136 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gm11487Q5RIS0 354 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ugt1a1Q63886 535 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Usp38Q8BW70 1042 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Commd10Q8JZY2 202 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Olfr532Q8VGT4 309 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ctnnbl1Q9CWL8 563 aaKnown RBP24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Coro7Q9D2V7 922 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 EloblA6PWE0 161 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Acp4D3YTS9 425 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gm4302E9PX25 294 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Krt13P08730 437 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 CcnoP0C242 352 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 PkmP52480 531 aaKnown RBP24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Pou6f1Q07916 301 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Hhla1Q3TYV2 514 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Fstl1Q62356 306 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Sh3gl2Q62420 352 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Vat1lQ80TB8 417 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Phf24Q80TL4 400 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Krt17Q9QWL7 433 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Kcnd2Q9Z0V2 630 aa24.26■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cntnap4Q99P47 1310 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gm43951A0A0N4SUT6 962 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Impa1O55023 277 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gjb3P28231 270 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Surf6P70279 355 aaKnown RBP24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Smyd1P97443 490 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ptcd3Q14C51 685 aaKnown RBP24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ppp4r3cQ3V0Y1 813 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lrfn2Q80TG9 788 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Il33Q8BVZ5 266 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lrrc45Q8CIM1 670 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 FechP22315 420 aaKnown RBP24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Eef1dP57776 281 aaKnown RBP24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Sppl2bQ3TD49 578 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ndst1Q3UHN9 882 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ppp1r7Q3UM45 361 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 CochQ62507 552 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cd300lfQ6SJQ7 337 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 R3hdm2Q80TM6 1044 aaKnown RBP24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 CyldQ80TQ2 952 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lztr1Q9CQ33 837 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ankrd2Q9WV06 328 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ppp2r3dQ9Z176 491 aa24.25■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lrrc73B2RWC4 316 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Tcp10bE9PYJ0 438 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Tmprss15P97435 1069 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Trim43aQ3TL54 445 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lrch2Q3UMG5 773 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cracr2aQ3UP38 310 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Sco1Q5SUC9 284 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 PrcpQ7TMR0 491 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Tor4aQ8BH02 426 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Lrrc66Q8K0B3 872 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Sgpl1Q8R0X7 568 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Ero1aQ8R180 464 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Pbx4Q99NE9 378 aa24.24■■□□□ 1.47
Upf3a-201ENSMUST00000043767 1700031M16RikA0A087WSH0 82 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Cyp2b23E9Q593 491 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Pja1O55176 578 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Gpr15Q0VDU3 360 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 RetsatQ64FW2 609 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Srrm3Q80WV7 648 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Mical2Q8BML1 960 aa24.23■■□□□ 1.47
Upf3a-201ENSMUST00000043767 Inpp5fQ8CDA1 1132 aa24.23■■□□□ 1.47
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms