RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Ppargc1aO70343 797 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lrrc6O88978 473 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Krt1P04104 637 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 UmpsP13439 481 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fmr1P35922 614 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 LeprP48356 1162 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pla2g6P97819 807 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fam198aQ3UY90 562 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Heatr9Q5QNV8 569 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tdrd5Q5VCS6 1040 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nfe2l2Q60795 597 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Q6GQU0 248 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ttc22Q8C159 568 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ano4Q8C5H1 955 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 ClmnQ8C5W0 1052 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 HibchQ8QZS1 385 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Grk2Q99MK8 689 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 GOLGA7BQ9D428 167 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Q9D937 123 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lypla2Q9WTL7 231 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Trim10Q9WUH5 489 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fam205a1D3YZF6 1314 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 CcnoP0C242 352 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pou5f1P20263 352 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Sar1aP36536 198 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gnl1P36916 607 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Pbx1P41778 430 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Grid1Q61627 1009 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Stambpl1Q76N33 436 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Epc2Q8C0I4 808 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Inpp5fQ8CDA1 1132 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nol6Q8R5K4 1152 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 DaglbQ91WC9 669 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Snx2Q9CWK8 519 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Nde1Q9CZA6 344 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Dnaaf1Q9D2H9 634 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Doc2gQ9ESN1 387 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Sv2aQ9JIS5 742 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Olig1Q9JKN5 260 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm11983V9GXS8 105 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 D430041D05RikF6ZGR6 1678 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Vmn2r77L7N2B7 854 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Scp2P32020 547 aaKnown RBP10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Cd86P42082 309 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Inpp1P49442 396 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ndufs6P52503 116 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Apba2P98084 750 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Slc24a2Q14BI1 711 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Kcnj11Q61743 390 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Zfp454Q80Y34 536 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ttc7aQ8BGB2 858 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gcfc2Q8BKT3 769 aa10.78□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Gm43302L7N1X8 611 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 NfibP97863 570 aaKnown RBP10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Fam198bQ3UPI1 517 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Ezh2Q61188 746 aaKnown RBP10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Creb3Q61817 404 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Lyve1Q8BHC0 318 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Chmp2bQ8BJF9 213 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Tcaf1Q8BNE1 924 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Palm2Q8BR92 376 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Kcnv1Q8BZN2 503 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Rgs10Q9CQE5 181 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Polr3cQ9D483 533 aa10.77□□□□□ -0.68
Ccdc40-201ENSMUST00000035935 Scgb2b7D3YYY1 112 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Zfy2P20662 777 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ZbbxQ0P5X5 716 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cyp2j11Q3UNV2 504 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mief2Q5NCS9 454 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Adam6bQ6IMH7 756 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Acap2Q6ZQK5 770 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Polr2eQ80UW8 210 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Fam53cQ8BXQ8 393 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Prpf31Q8CCF0 499 aaKnown RBP10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Prpf39Q8K2Z2 665 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 HyiQ8R1F5 277 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Havcr2Q8VIM0 281 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Rnf14Q9JI90 485 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ErmapQ9JLN5 566 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Hic1Q9R1Y5 733 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Kif9Q9WV04 790 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 M1apQ9Z0E1 529 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nrg3O35181 713 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Prl2c2P04095 224 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PrlrQ08501 608 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nat8lQ3UGX3 299 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Armc7Q3UJZ3 198 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Lgr6Q3UVD5 967 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Tmed1Q3V009 227 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 ChukQ60680 745 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Sema4bQ62179 823 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Far2Q7TNT2 515 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Nlrp4aQ8BU40 982 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 PreplQ8C167 725 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 D630039A03RikQ8K0M7 236 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 HlcsQ920N2 722 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cep72Q9D3R3 646 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Mms22lB1AUR6 1238 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Crabp2P22935 138 aa10.77□□□□□ -0.69
Ccdc40-201ENSMUST00000035935 Cyth2P63034 400 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms