RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C YNR048WP53740 393 aa3.9□□□□□ -1.78
EAR1YMR171C YMR082CQ04276 118 aa3.9□□□□□ -1.78
EAR1YMR171C AVO2Q04749 426 aa3.9□□□□□ -1.78
EAR1YMR171C YDR286CQ05530 114 aa3.9□□□□□ -1.78
EAR1YMR171C RDL2Q08742 149 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C NIP7Q08962 181 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C ISA2Q12425 185 aa3.9□□□□□ -1.78
EAR1YMR171C IZH2Q12442 317 aa3.9□□□□□ -1.78
EAR1YMR171C PAR32Q12515 295 aaKnown RBP3.9□□□□□ -1.78
EAR1YMR171C RPL31BP0C2H9 113 aaKnown RBP3.9□□□□□ -1.79
EAR1YMR171C SCO1P23833 295 aa3.9□□□□□ -1.79
EAR1YMR171C YCR101CP25607 182 aa3.9□□□□□ -1.79
EAR1YMR171C GLC7P32598 312 aaKnown RBP3.9□□□□□ -1.79
EAR1YMR171C REC114P32841 428 aa3.9□□□□□ -1.79
EAR1YMR171C FIG1P38224 298 aa3.9□□□□□ -1.79
EAR1YMR171C WSS1P38838 269 aa3.9□□□□□ -1.79
EAR1YMR171C YIL086CP40503 102 aa3.9□□□□□ -1.79
EAR1YMR171C PHS1P40857 217 aa3.9□□□□□ -1.79
EAR1YMR171C YJR012CP47087 207 aa3.9□□□□□ -1.79
EAR1YMR171C PAU4P53427 120 aa3.9□□□□□ -1.79
EAR1YMR171C MSO1P53604 210 aaKnown RBP3.9□□□□□ -1.79
EAR1YMR171C YDR102CQ03864 110 aa3.9□□□□□ -1.79
EAR1YMR171C YRA1Q12159 226 aaKnown RBP3.9□□□□□ -1.79
EAR1YMR171C SME1Q12330 94 aaPredicted RBP3.9□□□□□ -1.79
EAR1YMR171C COA6Q3E846 104 aa3.9□□□□□ -1.79
EAR1YMR171C SPS4P09937 338 aa3.89□□□□□ -1.79
EAR1YMR171C YLL053CP0CD98 152 aa3.89□□□□□ -1.79
EAR1YMR171C LSB5P25369 354 aa3.89□□□□□ -1.79
EAR1YMR171C MNS1P32906 549 aa3.89□□□□□ -1.79
EAR1YMR171C YBR013CP38215 129 aa3.89□□□□□ -1.79
EAR1YMR171C YIL169CP40442 995 aa3.89□□□□□ -1.79
EAR1YMR171C ATG27P46989 271 aa3.89□□□□□ -1.79
EAR1YMR171C GWT1P47026 490 aa3.89□□□□□ -1.79
EAR1YMR171C BNS1P50084 137 aa3.89□□□□□ -1.79
EAR1YMR171C NSA1P53136 463 aaPredicted RBP3.89□□□□□ -1.79
EAR1YMR171C SLX9P53251 210 aaPredicted RBP3.89□□□□□ -1.79
EAR1YMR171C YPL039WQ03080 316 aa3.89□□□□□ -1.79
EAR1YMR171C CUE4Q04201 117 aaPredicted RBP3.89□□□□□ -1.79
EAR1YMR171C FSH2Q05015 223 aa3.89□□□□□ -1.79
EAR1YMR171C HRI1Q05905 244 aaKnown RBP3.89□□□□□ -1.79
EAR1YMR171C YLR179CQ06252 201 aaKnown RBP3.89□□□□□ -1.79
EAR1YMR171C CTR3Q06686 241 aa3.89□□□□□ -1.79
EAR1YMR171C SRL1Q08673 210 aa3.89□□□□□ -1.79
EAR1YMR171C YLR365WQ7LIF2 110 aa3.89□□□□□ -1.79
EAR1YMR171C PAU19P0CE85 124 aa3.88□□□□□ -1.79
EAR1YMR171C PAU21P0CE86 164 aa3.88□□□□□ -1.79
EAR1YMR171C PAU22P0CE87 164 aa3.88□□□□□ -1.79
EAR1YMR171C PAU1P0CE88 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU14P0CE89 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU6P0CE90 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU18P0CE91 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU8P0CE92 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU11P0CE93 120 aa3.88□□□□□ -1.79
EAR1YMR171C RPL30P14120 105 aaKnown RBP3.88□□□□□ -1.79
EAR1YMR171C MRPL44P19956 98 aa3.88□□□□□ -1.79
EAR1YMR171C MDH2P22133 377 aa3.88□□□□□ -1.79
EAR1YMR171C PAU3P25610 124 aa3.88□□□□□ -1.79
EAR1YMR171C ERV1P27882 189 aa3.88□□□□□ -1.79
EAR1YMR171C CWP1P28319 239 aa3.88□□□□□ -1.79
EAR1YMR171C OCH1P31755 480 aa3.88□□□□□ -1.79
EAR1YMR171C ERG2P32352 222 aa3.88□□□□□ -1.79
EAR1YMR171C ACP1P32463 125 aa3.88□□□□□ -1.79
EAR1YMR171C AGA2P32781 87 aa3.88□□□□□ -1.79
EAR1YMR171C ALK2P32789 676 aaPredicted RBP3.88□□□□□ -1.79
EAR1YMR171C SWD2P36104 329 aaPredicted RBP3.88□□□□□ -1.79
EAR1YMR171C MRPL28P36527 147 aa3.88□□□□□ -1.79
EAR1YMR171C YBR096WP38256 230 aa3.88□□□□□ -1.79
EAR1YMR171C PAU13P38725 120 aa3.88□□□□□ -1.79
EAR1YMR171C HSP10P38910 106 aa3.88□□□□□ -1.79
EAR1YMR171C IRC22P40006 225 aa3.88□□□□□ -1.79
EAR1YMR171C YND1P40009 630 aa3.88□□□□□ -1.79
EAR1YMR171C OCA2P53949 197 aa3.88□□□□□ -1.79
EAR1YMR171C PAU10Q03050 120 aa3.88□□□□□ -1.79
EAR1YMR171C PAU20Q08322 120 aa3.88□□□□□ -1.79
EAR1YMR171C USB1Q12208 290 aaKnown RBP3.88□□□□□ -1.79
EAR1YMR171C HUT1Q12520 339 aa3.88□□□□□ -1.79
EAR1YMR171C PAU9Q3E770 120 aa3.88□□□□□ -1.79
EAR1YMR171C YHR214C-EQ8TGK0 99 aa3.88□□□□□ -1.79
EAR1YMR171C POL2P21951 2222 aaKnown RBP3.88□□□□□ -1.79
EAR1YMR171C CDC28P00546 298 aaKnown RBP3.87□□□□□ -1.79
EAR1YMR171C PEX4P29340 183 aa3.87□□□□□ -1.79
EAR1YMR171C SCM4P32564 187 aa3.87□□□□□ -1.79
EAR1YMR171C CPR5P35176 225 aa3.87□□□□□ -1.79
EAR1YMR171C UPS2P35200 230 aa3.87□□□□□ -1.79
EAR1YMR171C RPL14AP36105 138 aaKnown RBP3.87□□□□□ -1.79
EAR1YMR171C WSC4P38739 605 aa3.87□□□□□ -1.79
EAR1YMR171C RPL14BP38754 138 aaKnown RBP3.87□□□□□ -1.79
EAR1YMR171C POP2P39008 433 aa3.87□□□□□ -1.79
EAR1YMR171C PAU5P43575 122 aa3.87□□□□□ -1.79
EAR1YMR171C YDC1Q02896 317 aa3.87□□□□□ -1.79
EAR1YMR171C TSA2Q04120 196 aa3.87□□□□□ -1.79
EAR1YMR171C PAM18Q07914 168 aa3.87□□□□□ -1.79
EAR1YMR171C YOR186WQ08560 144 aa3.87□□□□□ -1.79
EAR1YMR171C COA2Q3E823 68 aa3.87□□□□□ -1.79
EAR1YMR171C YDR157WA0A023PZE8 133 aa3.87□□□□□ -1.79
EAR1YMR171C YHR214C-DP0CX93 97 aa3.87□□□□□ -1.79
EAR1YMR171C PDX1P16451 410 aa3.87□□□□□ -1.79
EAR1YMR171C MRS4P23500 304 aa3.87□□□□□ -1.79
EAR1YMR171C SPO13P23624 291 aa3.87□□□□□ -1.79
EAR1YMR171C SHO1P40073 367 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms