RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ITGB3P05106 788 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 CYP11A1P05108 521 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 ASGR2P07307 311 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 TMEM191BP0C7N4 346 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 ADCY1Q08828 1119 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 SNRNP35Q16560 246 aaKnown RBP16.22■□□□□ 0.19
PHGDH-231ENST00000641939 TRIM67Q6ZTA4 783 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 METTL23Q86XA0 190 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 C12orf56Q8IXR9 622 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 CSGALNACT2Q8N6G5 542 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 RDH13Q8NBN7 331 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 KIAA0895Q8NCT3 520 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 GOLGA5Q8TBA6 731 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 CCDC47Q96A33 483 aaKnown RBP16.22■□□□□ 0.19
PHGDH-231ENST00000641939 ANKRD36BP1Q96IX9 119 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 FAM84AQ96KN4 292 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 MYADMQ96S97 322 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 MTMR12Q9C0I1 747 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 INTS13Q9NVM9 706 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 EPS15L1Q9UBC2 864 aa16.22■□□□□ 0.19
PHGDH-231ENST00000641939 ZNF318Q5VUA4 2279 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 KPNA7A9QM74 516 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 FSHRP23945 695 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 NTHL1P78549 312 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 SIGLEC14Q08ET2 396 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 DPYDQ12882 1025 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 MTMR3Q13615 1198 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 MYBPC2Q14324 1141 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 DUOXA2Q1HG44 320 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 LMBRD2Q68DH5 695 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-231ENST00000641939 RNF19BQ6ZMZ0 732 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 GET4Q7L5D6 327 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-231ENST00000641939 UBALD2Q8IYN6 164 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 LRRC52Q8N7C0 313 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 CXorf38Q8TB03 319 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 BORCS6Q96GS4 357 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 CCDC34Q96HJ3 373 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 HCFC1R1Q9NWW0 138 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 INSL5Q9Y5Q6 135 aa16.21■□□□□ 0.19
PHGDH-231ENST00000641939 PTPRJQ12913 1337 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 RHOBTB3O94955 611 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 TNNC2P02585 160 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 KRT19P08727 400 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 OR4Q2P0C623 313 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 RBP5P82980 135 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 CYP24A1Q07973 514 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 GPR17Q13304 367 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 PABPC1LQ4VXU2 614 aaKnown RBP16.2■□□□□ 0.18
PHGDH-231ENST00000641939 WDR49Q8IV35 697 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 OR5B17Q8NGF7 314 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 FNBP1Q96RU3 617 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 KCNK12Q9HB15 430 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 IGSF9Q9P2J2 1179 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 DNMT3BQ9UBC3 853 aaKnown RBP16.2■□□□□ 0.18
PHGDH-231ENST00000641939 SIX4Q9UIU6 781 aa16.2■□□□□ 0.18
PHGDH-231ENST00000641939 R3HCC1Q9Y3T6 440 aaKnown RBP16.2■□□□□ 0.18
PHGDH-231ENST00000641939 ZFP37Q9Y6Q3 630 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-231ENST00000641939 TMEM221A6NGB7 291 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 M0R296 226 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 EXOC3O60645 756 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 PRPF40AO75400 957 aaKnown RBP16.19■□□□□ 0.18
PHGDH-231ENST00000641939 KIF20AO95235 890 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 VNN2O95498 520 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 DLATP10515 647 aaKnown RBP16.19■□□□□ 0.18
PHGDH-231ENST00000641939 LAMP2P13473 410 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 PTPN2P17706 415 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 COL9A1P20849 921 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 BFSP1Q12934 665 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 MYO1EQ12965 1108 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 PSMD6Q15008 389 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 WSCD1Q658N2 575 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 FMR1NBQ8N0W7 255 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-231ENST00000641939 THEM5Q8N1Q8 247 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 ELMOD1Q8N336 334 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 OR10T2Q8NGX3 314 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 MFSD14AQ96MC6 490 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 PGLYRP2Q96PD5 576 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 TMEM209Q96SK2 561 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 CGRRF1Q99675 332 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
PHGDH-231ENST00000641939 CIZ1Q9ULV3 898 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-231ENST00000641939 PDXKO00764 312 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 HUS1O60921 280 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 RHOP08100 348 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 TNNI1P19237 187 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 TWF1Q12792 350 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 DUSP4Q13115 394 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 TDGQ13569 410 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 KCNB1Q14721 858 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 HFE2Q6ZVN8 426 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 SLC9A9Q8IVB4 645 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 ITFG1Q8TB96 612 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 TMEM174Q8WUU8 243 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 NXPE3Q969Y0 559 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 RTP3Q9BQQ7 232 aa16.18■□□□□ 0.18
PHGDH-231ENST00000641939 AVENQ9NQS1 362 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-231ENST00000641939 DMAC2Q9NW81 257 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms