RNA–Protein interactions for RNA: ENST00000641642.1

CASC19-247, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-247ENST00000641642 WDR44Q5JSH3 913 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 CBWD3Q5JTY5 395 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 CBWD5Q5RIA9 395 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
CASC19-247ENST00000641642 ENOSF1Q7L5Y1 443 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.12□□□□□ -0.63
CASC19-247ENST00000641642 FMNL3Q8IVF7 1028 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 C1orf127Q8N9H9 656 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 OR5B17Q8NGF7 314 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 HELQQ8TDG4 1101 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 JAKMIP2Q96AA8 810 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
CASC19-247ENST00000641642 POP1Q99575 1024 aaKnown RBP11.12□□□□□ -0.63
CASC19-247ENST00000641642 RAD9AQ99638 391 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 EDEM3Q9BZQ6 932 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 MTMR12Q9C0I1 747 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 RC3H2Q9HBD1 1191 aaKnown RBP11.12□□□□□ -0.63
CASC19-247ENST00000641642 TBC1D13Q9NVG8 400 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 MIOSQ9NXC5 875 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 IFNKQ9P0W0 207 aa11.12□□□□□ -0.63
CASC19-247ENST00000641642 TBKBP1A7MCY6 615 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
CASC19-247ENST00000641642 ALDH2P05091 517 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 FGFR1P11362 822 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
CASC19-247ENST00000641642 CDC25BP30305 580 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 DEFB103AP81534 67 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 TRIM14Q14142 442 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 UPP1Q16831 310 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 GLRA4Q5JXX5 417 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 C9orf57Q5W0N0 161 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 DCLRE1AQ6PJP8 1040 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 DPH6Q7L8W6 267 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 HERC6Q8IVU3 1022 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 COLGALT2Q8IYK4 626 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 CXorf38Q8TB03 319 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 SPATA18Q8TC71 538 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 YME1L1Q96TA2 773 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 COLEC11Q9BWP8 271 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 UBE2OQ9C0C9 1292 aaKnown RBP11.11□□□□□ -0.63
CASC19-247ENST00000641642 XPO4Q9C0E2 1151 aaKnown RBP11.11□□□□□ -0.63
CASC19-247ENST00000641642 GCNT4Q9P109 453 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 INPP5FQ9Y2H2 1132 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 RWDD3Q9Y3V2 267 aa11.11□□□□□ -0.63
CASC19-247ENST00000641642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.11□□□□□ -0.63
CASC19-247ENST00000641642 PTPRJQ12913 1337 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 UPP2O95045 317 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 POMCP01189 267 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 HLA-DRAP01903 254 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 ITGB3P05106 788 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 LAG3P18627 525 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 TBXAS1P24557 533 aaPredicted RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 PON1P27169 355 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 PBX1P40424 430 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 PIK3CAP42336 1068 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 ALDH7A1P49419 539 aaKnown RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 TAF6P49848 677 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 GCNT1Q02742 428 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 ELAVL2Q12926 359 aaKnown RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 BTG3Q14201 252 aaPredicted RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 SV2CQ496J9 727 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 TRIM65Q6PJ69 517 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 NPAS3Q8IXF0 933 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 LMO3Q8TAP4 145 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 TAS1R2Q8TE23 839 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 BAP1Q92560 729 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 HPDLQ96IR7 371 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 RNPC3Q96LT9 517 aaKnown RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 NT5C1BQ96P26 610 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 MMRN2Q9H8L6 949 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 GDAP2Q9NXN4 497 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 CXXC1Q9P0U4 656 aaPredicted RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 NXF1Q9UBU9 619 aaKnown RBP11.1□□□□□ -0.63
CASC19-247ENST00000641642 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 PLAGL2Q9UPG8 496 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 SIK3Q9Y2K2 1263 aa11.1□□□□□ -0.63
CASC19-247ENST00000641642 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 H0YGN5 161 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 PODXLO00592 558 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 TEX33O43247 280 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 VNN1O95497 513 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 CST3P01034 146 aaPredicted RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 KRT19P08727 400 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 TPM1P09493 284 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 VARSP26640 1264 aaKnown RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 POLR2BP30876 1174 aaKnown RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 PPM1AP35813 382 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 AARSP49588 968 aaKnown RBP eCLIP11.09□□□□□ -0.63
CASC19-247ENST00000641642 ZNF75DP51815 510 aa11.09□□□□□ -0.63
CASC19-247ENST00000641642 AFF1P51825 1210 aaKnown RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 YWHAEP62258 255 aaKnown RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
CASC19-247ENST00000641642 SOX4Q06945 474 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms