RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 APOBEC3GQ9HC16 384 aaKnown RBP23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 ENTPD7Q9NQZ7 604 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 POLIQ9UNA4 740 aa23.13■■□□□ 1.29
TSPAN9-208ENST00000640568 SLC9A1P19634 815 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 PON1P27169 355 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 GLUD2P49448 558 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 UVSSAQ2YD98 709 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 TRIM65Q6PJ69 517 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 DPH6Q7L8W6 267 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 TMC7Q7Z402 723 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 PPM1KQ8N3J5 372 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 LMO3Q8TAP4 145 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 LRCH3Q96II8 777 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 NAP1L5Q96NT1 182 aaPredicted RBP23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 LSM14BQ9BX40 385 aaKnown RBP23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 VN1R3Q9BXE9 311 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 TLR9Q9NR96 1032 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 SSX2IPQ9Y2D8 614 aa23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 TIMM13Q9Y5L4 95 aaPredicted RBP23.12■■□□□ 1.29
TSPAN9-208ENST00000640568 GRM6O15303 877 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 LPXNO60711 386 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TYMPP19971 482 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 FGFR3P22607 806 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TBXAS1P24557 533 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 YWHAHQ04917 246 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TAS1R1Q7RTX1 841 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 RNF168Q8IYW5 571 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TMEM86AQ8N2M4 240 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TATDN2Q93075 761 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 FAXDC2Q96IV6 333 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 B3GALT6Q96L58 329 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 LMAN2LQ9H0V9 348 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 ZBP1Q9H171 429 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 L1RE1Q9UN81 338 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 C2CD2LO14523 706 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TEX33O43247 280 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 KCNMA1Q12791 1236 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 NR1I3Q14994 352 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 SYCP1Q15431 976 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 HABP4Q5JVS0 413 aaKnown RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 PDXDC1Q6P996 788 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 ADGRF2Q8IZF7 708 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 MICAL1Q8TDZ2 1067 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 RIN2Q8WYP3 895 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 FAM81BQ96LP2 452 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 ERGIC2Q96RQ1 377 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 TCF25Q9BQ70 676 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 MRPL17Q9NRX2 175 aaKnown RBP23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 APEX2Q9UBZ4 518 aa23.11■■□□□ 1.29
TSPAN9-208ENST00000640568 EFEMP2O95967 443 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 CYP11A1P05108 521 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 CTSAP10619 480 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 ASPAP45381 313 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 SOWAHAQ2M3V2 549 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 RTP2Q5QGT7 225 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 VARS2Q5ST30 1063 aaKnown RBP23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 WSCD1Q658N2 575 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 OVOS1Q6IE37 1185 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 ZNF280DQ6N043 979 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 ANKS3Q6ZW76 656 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 THEM5Q8N1Q8 247 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 PDCL2Q8N4E4 241 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 TRIM5Q9C035 493 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 XPO4Q9C0E2 1151 aaKnown RBP23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 SMYD3Q9H7B4 428 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 CYP3A43Q9HB55 503 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 CHST7Q9NS84 486 aa23.1■■□□□ 1.29
TSPAN9-208ENST00000640568 EPOPA6NHQ4 379 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 H7C4K7 107 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 RAP1GAPP47736 663 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 YWHAEP62258 255 aaKnown RBP23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 DSG1Q02413 1049 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 CUL2Q13617 745 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 SMC1AQ14683 1233 aaKnown RBP23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 PTPROQ16827 1216 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 PLPP4Q5VZY2 271 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 SARM1Q6SZW1 724 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 NEK11Q8NG66 645 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 SPATA18Q8TC71 538 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 SNX25Q9H3E2 840 aa23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 NGRNQ9NPE2 291 aaKnown RBP23.09■■□□□ 1.29
TSPAN9-208ENST00000640568 RFXAPO00287 272 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 TACC1O75410 805 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 DNAJB1P25685 340 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 LHX1P48742 406 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 CDH8P55286 799 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 GCNT1Q02742 428 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 CREMQ03060 361 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 PSMD5Q16401 504 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 PDE12Q6L8Q7 609 aaKnown RBP23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 RRAGAQ7L523 313 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 ARHGEF19Q8IW93 802 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 OR6B3Q8NGW1 331 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 PIK3R5Q8WYR1 880 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 BCO2Q9BYV7 579 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 TTYH1Q9H313 450 aaPredicted RBP23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 UBE2TQ9NPD8 197 aaPredicted RBP23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 FAM207AQ9NSI2 230 aaPredicted RBP23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 ATG2AQ2TAZ0 1938 aa23.08■■□□□ 1.29
TSPAN9-208ENST00000640568 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms