RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CCND2P30279 289 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 HMGCS2P54868 508 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 WDR4P57081 412 aaKnown RBP15.44■□□□□ 0.06
SCARB2-221ENST00000640341 BPIFB4P59827 614 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 NOMO3P69849 1222 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 MGAT5Q09328 741 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 ECHDC2Q86YB7 292 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 FAM81BQ96LP2 452 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 IMPG2Q9BZV3 1241 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 TRABDQ9H4I3 376 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 DCTN4Q9UJW0 460 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 A0A1W2PPM1 405 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 H0Y3Z8 333 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 MAPK13O15264 365 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 VNN1O95497 513 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 PSAPP07602 524 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 NRLP54845 237 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 TCEAL1Q15170 157 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 CCNG2Q16589 344 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 ZACNQ401N2 412 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 CGB2Q6NT52 195 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 NIM1KQ8IY84 436 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 SLC9A2Q9UBY0 812 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 HAO1Q9UJM8 370 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 SYNPO2Q9UMS6 1093 aa15.44■□□□□ 0.06
SCARB2-221ENST00000640341 EXTL3O43909 919 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 GSTA1P08263 222 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 MARK3P27448 753 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 RPA3P35244 121 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CENPCQ03188 943 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 OVGP1Q12889 678 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 EMC2Q15006 297 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 EFTUD2Q15029 972 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TNFAIP8L3Q5GJ75 292 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 DNAJC24Q6P3W2 148 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 ABRAQ8N0Z2 381 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 MCPH1Q8NEM0 835 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 SMC6Q96SB8 1091 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CCDC134Q9H6E4 229 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 NXF1Q9UBU9 619 aaKnown RBP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 PCSK1NQ9UHG2 260 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CST3P01034 146 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TAC1P20366 129 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TNFSF9P41273 254 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 NCOA4Q13772 614 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 SETDB1Q15047 1291 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TMEM63BQ5T3F8 832 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 HHATQ5VTY9 493 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 NIPA1Q7RTP0 329 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TTLL6Q8N841 843 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 FEZF2Q8TBJ5 459 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 ZNF606Q8WXB4 792 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TRIM11Q96F44 468 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 SENP7Q9BQF6 1050 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 HAPLN2Q9GZV7 340 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 QSER1Q2KHR3 1735 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 PIK3R2O00459 728 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 VWA5AO00534 786 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 SSTR1P30872 391 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 MSH2P43246 934 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CXCL9Q07325 125 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 KLF1Q13351 362 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 ENOSF1Q7L5Y1 443 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 FLAD1Q8NFF5 587 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 ASAP3Q8TDY4 903 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 FBF1Q8TES7 1133 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 RSRC1Q96IZ7 334 aaKnown RBP15.43■□□□□ 0.06
SCARB2-221ENST00000640341 FBXL18Q96ME1 805 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CFAP57Q96MR6 1250 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 PHTF1Q9UMS5 762 aa15.43■□□□□ 0.06
SCARB2-221ENST00000640341 CFAP73A6NFT4 308 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 TTLL13PA6NNM8 815 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 KRT19P08727 400 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 LACTBP83111 547 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-221ENST00000640341 TFAMQ00059 246 aaKnown RBP15.42■□□□□ 0.06
SCARB2-221ENST00000640341 STAT4Q14765 748 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 TRIM68Q6AZZ1 485 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 PPP1R21Q6ZMI0 780 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 VSIG10LQ86VR7 867 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 LRRC8CQ8TDW0 803 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 TIPINQ9BVW5 301 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 MTMR12Q9C0I1 747 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 MYLK2Q9H1R3 596 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 KIAA1586Q9HCI6 787 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 A1CFQ9NQ94 594 aaKnown RBP15.42■□□□□ 0.06
SCARB2-221ENST00000640341 AVENQ9NQS1 362 aaPredicted RBP15.42■□□□□ 0.06
SCARB2-221ENST00000640341 MYBL1P10243 752 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 SNRPFP62306 86 aaKnown RBP15.42■□□□□ 0.06
SCARB2-221ENST00000640341 CAV1Q03135 178 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 MAGEB18Q96M61 343 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 RXFP1Q9HBX9 757 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 PARVAQ9NVD7 372 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 RGS20O76081 388 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 CBX6O95503 412 aa15.42■□□□□ 0.06
SCARB2-221ENST00000640341 C4BPAP04003 597 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms