RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 NCAPHQ15003 741 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ZACNQ401N2 412 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 TMEM270Q6UE05 265 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 IRF2BP1Q8IU81 584 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SLC39A11Q8N1S5 342 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 RSPH1Q8WYR4 309 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 NAP1L5Q96NT1 182 aaPredicted RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SAMD11Q96NU1 681 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 NIF3L1Q9GZT8 377 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SMYD3Q9H7B4 428 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 DDX43Q9NXZ2 648 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 WDR81Q562E7 1941 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 FAM189A1O60320 539 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 OR4Q2P0C623 313 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ADORA2BP29275 332 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 OR1D2P34982 312 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 KLK7P49862 253 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SMAD3P84022 425 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SMC1AQ14683 1233 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 UPP1Q16831 310 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 TDRD12Q587J7 1177 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 TAS1R1Q7RTX1 841 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ZNF397Q8NF99 534 aaPredicted RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SEMA4DQ92854 862 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ZNF689Q96CS4 500 aaPredicted RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 TSPAN18Q96SJ8 248 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 EMILIN2Q9BXX0 1053 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ABI2Q9NYB9 513 aaPredicted RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 LIMA1Q9UHB6 759 aaKnown RBP6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 SIX4Q9UIU6 781 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 PCDHGC5Q9Y5F6 944 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 ARID2Q68CP9 1835 aa6.21□□□□□ -1.42
HNRNPU-220ENST00000639667 CARNS1A5YM72 827 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 LGALS16A8MUM7 142 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 PRRG1O14668 218 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ATICP31939 592 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 TAF3Q5VWG9 929 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SCARA3Q6AZY7 606 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ALKAL1Q6UXT8 129 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 DEFB123Q8N688 67 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 LRRC52Q8N7C0 313 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 C3orf58Q8NDZ4 430 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SEPT5Q99719 369 aaPredicted RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 PIDD1Q9HB75 910 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 TLR9Q9NR96 1032 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 FAM49BQ9NUQ9 324 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SPTLC1O15269 473 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 MEFVO15553 781 aaPredicted RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 VNN1O95497 513 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ABL1P00519 1130 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 RB1P06400 928 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 PCSK1P29120 753 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 POU5F1Q01860 360 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 HABP4Q5JVS0 413 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 VARS2Q5ST30 1063 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 LIN9Q5TKA1 542 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 CDKAL1Q5VV42 579 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ACOT1Q86TX2 421 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SPATA2LQ8IUW3 424 aaPredicted RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 MRPL45Q9BRJ2 306 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ZNHIT6Q9NWK9 470 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 DSEQ9UL01 958 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 CDY1Q9Y6F8 540 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 LRPAP1P30533 357 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 NRIP1P48552 1158 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 DSC1Q08554 894 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 MGAT5BQ3V5L5 792 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SLC39A12Q504Y0 691 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 RASIP1Q5U651 963 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ANKS3Q6ZW76 656 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 ARHGEF19Q8IW93 802 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 DCP1BQ8IZD4 617 aaKnown RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 BCL7CQ8WUZ0 217 aaPredicted RBP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 KAT5Q92993 513 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SYT15Q9BQS2 421 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 CYP4F11Q9HBI6 524 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 L1RE1Q9UN81 338 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SSX2IPQ9Y2D8 614 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 TTC3P53804 2025 aa6.2□□□□□ -1.42
HNRNPU-220ENST00000639667 SOX1O00570 391 aaPredicted RBP6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 PIRO00625 290 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 THAP12O43422 761 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 ADCY5O95622 1261 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 SOD2P04179 222 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 TBXAS1P24557 533 aaPredicted RBP6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 NDST1P52848 882 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 ERVFC1P60507 584 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 ERVK-21P61565 698 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 CUL2Q13617 745 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 GSE1Q14687 1217 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 GRIN2CQ14957 1233 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 MDH1BQ5I0G3 518 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 SPPL3Q8TCT6 385 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 MYLIPQ8WY64 445 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 TAF4BQ92750 862 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 KCNN1Q92952 543 aa6.19□□□□□ -1.42
HNRNPU-220ENST00000639667 SUSD3Q96L08 255 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms