RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 OGTO15294 1046 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 FNTAP49354 379 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 KPNA2P52292 529 aaKnown RBP15.16■□□□□ 0.02
SCARB2-216ENST00000639300 GLRA4Q5JXX5 417 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
SCARB2-216ENST00000639300 TRIM56Q9BRZ2 755 aaKnown RBP15.16■□□□□ 0.02
SCARB2-216ENST00000639300 ARHGEF37A1IGU5 675 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 PPFIA2O75334 1257 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 KCNMA1Q12791 1236 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 CHST13Q8NET6 341 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 PDCD6IPQ8WUM4 868 aaKnown RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 RAPGEF5Q92565 580 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 ARHGEF26Q96DR7 871 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 DDX27Q96GQ7 796 aaKnown RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 BEGAINQ9BUH8 593 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 PXMP2Q9NR77 195 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 H3BRJ5 948 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 KDSRQ06136 332 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 KDM7AQ6ZMT4 941 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 SLC5A5Q92911 643 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 SPDL1Q96EA4 605 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 SGSM3Q96HU1 749 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 ERAP1Q9NZ08 941 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 SCOCQ9UIL1 159 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 HBP1O60381 514 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 MUTP22033 750 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 CORO7P57737 925 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 EMC1Q8N766 993 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 PRMT7Q9NVM4 692 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 GTSE1Q9NYZ3 720 aa15.15■□□□□ 0.02
SCARB2-216ENST00000639300 PSMC3IPQ9P2W1 217 aaPredicted RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 SMG5Q9UPR3 1016 aaKnown RBP15.15■□□□□ 0.02
SCARB2-216ENST00000639300 E2F8A0AVK6 867 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 WNT10BO00744 389 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 SUPT20HL2P0C7V6 817 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 COG7P83436 770 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 CYP24A1Q07973 514 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 AMHR2Q16671 573 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-216ENST00000639300 PCNX4Q63HM2 1172 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 PIP4K2CQ8TBX8 421 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 KCND1Q9NSA2 647 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 CFAP73A6NFT4 308 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 MAGEB2O15479 319 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 MYL6P60660 151 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 THEM5Q8N1Q8 247 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 TSEN2Q8NCE0 465 aaKnown RBP15.14■□□□□ 0.01
SCARB2-216ENST00000639300 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCARB2-216ENST00000639300 STOML1Q9UBI4 398 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 FZD1Q9UP38 647 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 ATP8B3O60423 1300 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 CCT8L1PA6NM43 557 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 GARTP22102 1010 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 TSPY1Q01534 308 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 CCDC33Q8N5R6 958 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 C4orf32Q8N8J7 132 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 UBN1Q9NPG3 1134 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 RARGP13631 454 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 RAD23BP54727 409 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 POLE2P56282 527 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 ZNF200P98182 395 aaPredicted RBP15.14■□□□□ 0.01
SCARB2-216ENST00000639300 KLC3Q6P597 504 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 SPIRE2Q8WWL2 714 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 CDC42EP4Q9H3Q1 356 aaKnown RBP15.14■□□□□ 0.01
SCARB2-216ENST00000639300 TMBIM4Q9HC24 238 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 ANGPTL2Q9UKU9 493 aa15.14■□□□□ 0.01
SCARB2-216ENST00000639300 TTC4O95801 387 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 GH1P01241 217 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 PYGMP11217 842 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 ZFXP17010 805 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 GLIS2Q9BZE0 524 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 TYW5A2RUC4 315 aaKnown RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 ASAP2O43150 1006 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 PGM5Q15124 567 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 DCAF6Q58WW2 860 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 HABP4Q5JVS0 413 aaKnown RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 TMCO4Q5TGY1 634 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 LVRNQ6Q4G3 990 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 TMEM139Q8IV31 216 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 DTX3LQ8TDB6 740 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 TMC2Q8TDI7 906 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 CLMNQ96JQ2 1002 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 PPP1R36Q96LQ0 422 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 TSSK1BQ9BXA7 367 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 RSAD1Q9HA92 442 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 KCNMB3Q9NPA1 279 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 A0A0A6YYK5 440 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 KPNA7A9QM74 516 aa15.13■□□□□ 0.01
SCARB2-216ENST00000639300 C6orf222P0C671 652 aaPredicted RBP15.13■□□□□ 0.01
SCARB2-216ENST00000639300 RPS12P25398 132 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms