RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 RNF207Q6ZRF8 634 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 DNAAF5Q86Y56 855 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SLFN12Q8IYM2 578 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ELMOD2Q8IZ81 293 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MARCH10Q8NA82 808 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AFG1LQ8WV93 481 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RNF38Q9H0F5 515 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MYLK2Q9H1R3 596 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 LIN7BQ9HAP6 207 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NKIRAS2Q9NYR9 191 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 STX8Q9UNK0 236 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TTC21AQ8NDW8 1320 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PLEKHG1Q9ULL1 1385 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 A0A0J9YVX5 310 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TLR2O60603 784 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MAFO75444 373 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SEC24BO95487 1268 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ATP6V1G2O95670 118 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ZBED1O96006 694 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AFMP43652 599 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 STX5Q13190 355 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF423Q2M1K9 1284 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CMPK2Q5EBM0 449 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TCTE1Q5JU00 501 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MICU3Q86XE3 530 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CADM3Q8N126 398 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PPM1NQ8N819 430 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CLHC1Q8NHS4 586 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GANCQ8TET4 914 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MRPS27Q92552 414 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 RAB3IPQ96QF0 476 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 HAPLN3Q96S86 360 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PIP5K1AQ99755 562 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 B3GNT4Q9C0J1 378 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CPSF3Q9UKF6 684 aaKnown RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PACSIN2Q9UNF0 486 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 CUX2O14529 1486 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 WNK3Q9BYP7 1800 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 SMIM31A0A1B0GVY4 71 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 LRRC14BA6NHZ5 514 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PRSS44E7EML9 344 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 APAF1O14727 1248 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 MAP2K7O14733 419 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NCK2O43639 380 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GSTM2P28161 218 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 GNAI1P63096 354 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 ANGPT1Q15389 498 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 PLBD1Q6P4A8 553 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 BLOC1S2Q6QNY1 142 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TBCBQ99426 244 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 TIPINQ9BVW5 301 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AKAP7Q9P0M2 348 aaPredicted RBP4.52□□□□□ -1.69
SCN3A-209ENST00000639244 AKAP11Q9UKA4 1901 aa4.52□□□□□ -1.69
SCN3A-209ENST00000639244 NUDT19A8MXV4 375 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 WASLO00401 505 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 WNT7AO00755 349 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 CAPN9O14815 690 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SASH3O75995 380 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MAN2A2P49641 1150 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TSPAN5P62079 268 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 R3HDM1Q15032 1099 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 GLYCTKQ8IVS8 523 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TCEANC2Q96MN5 208 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM168Q9H0V1 697 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 UCK1Q9HA47 277 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PTTG2Q9NZH5 202 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 V9GYQ6 96 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SNRNP200O75643 2136 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ALDH1A2O94788 518 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 EEF1DP29692 281 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ENPEPQ07075 957 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SPIRE1Q08AE8 756 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 KRT26Q7Z3Y9 468 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 RPRD1AQ96P16 312 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 SPATA16Q9BXB7 569 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 EPN3Q9H201 632 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 EXTL2Q9UBQ6 330 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ADGRE2Q9UHX3 823 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 PARP3Q9Y6F1 533 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LZTS3O60299 673 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ECE2O60344 883 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ATF4P18848 351 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 MZF1P28698 734 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 KCNJ5P48544 419 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 CACNB3P54284 484 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 GIT2Q14161 759 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ACCSLQ4AC99 568 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 FAM209BQ5JX69 171 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TLK2Q86UE8 772 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ZC3H18Q86VM9 953 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 LZTR1Q8N653 840 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 TIFAQ96CG3 184 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 EMILIN2Q9BXX0 1053 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 UNKQ9C0B0 810 aaKnown RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 OR51B5Q9H339 312 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 ATF5Q9Y2D1 282 aaPredicted RBP4.51□□□□□ -1.69
SCN3A-209ENST00000639244 DERAQ9Y315 318 aa4.51□□□□□ -1.69
SCN3A-209ENST00000639244 NR2E3Q9Y5X4 410 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms